Anopheles funestus (African malaria mosquito): 125765858
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Entry
125765858 CDS
T09273
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
afun
Anopheles funestus (African malaria mosquito)
Pathway
afun03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
afun00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125765858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afun03021
]
125765858
03019 Messenger RNA biogenesis [BR:
afun03019
]
125765858
Transcription machinery [BR:
afun03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125765858
Messenger RNA biogenesis [BR:
afun03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
125765858
U7-dependent histone pre-mRNA processing factors
125765858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
HEAT_ECM29
Motif
Other DBs
NCBI-GeneID:
125765858
NCBI-ProteinID:
XP_049287302
LinkDB
All DBs
Position
2:37845654..37849875
Genome browser
AA seq
1190 aa
AA seq
DB search
MENLLRGSSSFSEAAMLFTDEKIANARTKIVEALNETQTANATQKCEIIAKIQELLLHTD
VELLNEFLENILVFAHDVASDVRKAIAGFIEEVCKQHIATLPKVVGTLFSLLRDSIPNVT
KRVIQGCGSIYRLAIQWICQLDDIPEEVEQAWNTLCLMKISILDKIDDDNDGIRTNAIKF
LEGVVILQTYPDEDSLKRANDFSLADVPLTMKQIRRRKLEDEATNIFELLLQFHAASHIS
SVNLIACTGTLCTIAKLRPSTMTRVVEALKHLHSNLPPTLTNSQVSSVRKNLKMQFLNLL
KHPASFEHQATMAQILVDLGASNGEITRAIPKMDKKEQQRRAKRALENSMASQLAAKRAK
LDGQMRKDKDDSSGEMRDQPRTMEIDYEELNEQKNRSNQQNEQFLVEVLQKTDLVAQLVI
TNMDKLSEQMLQNAKPTAVHSVEQYIKKIAQTLAAQMSDVKVGPGASAFTKDPPMKVRIS
DEEEKNIILSGKRKLGDPSAERSSTPTTADQADDDLPEGAGEEEEDDEALSEEDRKKLEA
TRKLRETLERVKGGTAGTGGEPKQRQRIKMLKLQEITKPLPKATKETFLIDAVMRILKAE
RQALVGGVSTQRHRIITAFGSSFVNPVRDVIMEHILEDLPKRIELAFSWIFEEYGLMQGF
TRYTHVKHDNGPQYPYTQLLVRLVTNIIDRPKETFRPKESLLKRLYLEAPMIPQELIDLL
VRMCELEELADCGMQIVKDLLIRRPPRERQYLDILLKYSYYENGTIREKAIEYVMNVFAV
HRIMTEQIEKNALSWLAYLEHENPTESMFAVEYGRAEHPRTWTEELAKVCLGLFLEVMVY
DQTLLMRFSEVYIKATSEMKRAVIRAIEGPIRKIGSESEELLRLIEQCPKGSETIIIRII
YILTEKSLPSSDLVDRVRTLHQTKVSDVRLLIPVINGLTKKEILNALPKLIKLNPGVVKE
VFNRLLGIGVEYGTAELPLNPVELLVALHTIETSKVELKFIVKATSLCLAEKEVYTHDVL
GSVMQQLVEIAPLPTLLMRTVIQSLTLHPRLSGFVTNLLQRLILKQVWKQKVVWDGFLKC
AQRLTPQSLGILIQLPAQQLQDAITICPEFREPMLEHAREIMEHQIGHVSQQVMDVLLGI
SPYSTTESSDLQIVSNYTDDAPMSSHLPVKIKLEKDVDPPVAPTPAQGKE
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggagaacctactgcgcggttcgtctagcttcagcgaagctgcaatgctattcaccgat
gaaaagattgccaacgcacgaacgaagatcgtcgaagcactgaacgaaacgcaaacagca
aatgccacccagaagtgtgaaataattgccaaaatacaggaactcttactgcacacggac
gtggagttgctgaatgaatttctggaaaacatactagtgttcgctcacgatgtggcctcc
gatgtgcggaaagcgattgccggcttcatagaggaagtctgcaagcagcacatcgcaaca
ctaccgaaggttgttggcacgctgttttccctgctgcgggattccattcctaacgtcact
aagcgtgtgattcagggctgtgggtccatctaccggttggcgatacagtggatctgtcag
ctggacgatatccccgaggaggtggagcaagcttggaatacgctgtgtctgatgaagatt
tccatcctggacaagatcgatgatgataacgatggaatacggacgaatgcgatcaagttt
ctggagggagtagtgatactgcaaacgtacccggacgaggatagtttgaagcgcgcgaac
gatttctcgctcgcggatgtaccactcacgatgaagcagatccgccgccgtaagttggaa
gacgaagcgaccaacatcttcgagctgctgttacagttccatgctgcgtcacacatttcc
tcggttaatctgattgcctgtaccggtacgctttgtaccattgcaaagctgcgtccttcc
acgatgacgcgtgtggtagaagcgctcaagcaccttcactcgaatttgcccccaacgctg
accaattcgcaggttagttcggtgcgtaagaacttgaagatgcagtttctaaacttgctc
aaacatccggcaagttttgagcatcaagccacaatggcacagatactggtcgatctgggt
gcctccaatggtgagataacgcgagccattccgaagatggacaaaaaggaacaacagcgt
cgtgcgaaacgggcactggaaaactcgatggcatctcagctggcagcgaaacgtgccaaa
ttggacggacagatgcgaaaggacaaggatgatagttcgggcgaaatgcgcgatcaacca
cgcaccatggagatcgactacgaggagttaaacgaacagaaaaaccgttccaaccaacag
aacgaacaatttcttgttgaggtgctgcaaaagacggatctggtcgcacagctggtcatt
acaaacatggacaaactctccgaacaaatgctgcaaaatgcaaaacccacggcagtgcat
tcggtggagcaatacattaaaaaaatcgcacaaacgttggccgcccaaatgagcgacgtc
aaggtcggaccgggtgcgagtgccttcacgaaggatcccccgatgaaggtacgcataagc
gacgaggaggagaagaatataatcctttcgggcaagcgaaagcttggtgacccatccgcg
gaacgatcgtcgacaccgactaccgccgatcaggcggatgacgatctgccagaaggtgcc
ggcgaggaggaggaagacgatgaagcgctctccgaggaagatcgcaagaagctggaggca
acgcgaaagcttagagagacactggagcgcgtcaagggcggtacggcaggtaccggaggc
gaaccgaaacagcgacagcgtataaaaatgttaaaattgcaagaaattacaaaacccctt
ccaaaagccaccaaggaaacgttcctgattgatgccgtgatgcgaatattgaaagcggaa
cggcaagcactggttggaggcgttagtacgcagcggcatcgtatcattacggcgttcggt
tcatcatttgtcaatcccgtgcgggacgtgatcatggagcacattctggaggatctaccc
aagcgaatcgagctagcgttttcgtggatctttgaggagtacggactcatgcagggcttt
acccgttacacgcacgtcaagcacgacaatggaccacagtacccctacacacaactgctg
gtacggctcgtaacgaacatcatcgatcgtccgaaggaaacgttccgcccgaaagaatca
ctgctgaaacggctctacctggaagcgcccatgattccgcaggagctgatcgacttgttg
gtgcgtatgtgcgagctggaagagctggccgactgtggaatgcagatcgtgaaggatttg
cttatccgtcggccaccgcgagagcgtcagtatttggacattctgctcaaatattcatac
tacgaaaatggcacgatacgcgagaaagcgatcgagtacgtaatgaacgtgtttgccgtc
catcgcattatgacggagcagatcgaaaagaatgcgctcagctggttagcatatctggag
catgagaatccaaccgaatcaatgttcgccgtagagtacggacgggcggaacatccgcgc
acgtggacggaagagctggccaaagtttgtctcgggctgtttctcgaggtgatggtgtac
gatcaaacgctgctgatgcgcttttcggaggtgtacattaaggccacctcggagatgaag
cgtgccgtgatacgggcgatcgaaggtccgattcgaaagattggttcggagagtgaagaa
ctgttgcgactgatcgaacagtgcccaaagggttcggaaacgatcatcatacgtattatc
tatatactcacggagaagtccctaccatcatccgatcttgtcgaccgtgtccggacactg
caccaaacaaaggtgtccgacgtgcgattgcttataccggttataaatggtttaacgaag
aaggaaatccttaacgcactgcccaaactcatcaaattgaatccgggcgttgtgaaggaa
gtgttcaaccgactccttggcatcggtgtcgagtatggtacggccgagctgccactaaat
ccagtcgagctgctcgtcgcattgcacacgatcgaaacgagcaaggtggagctgaagttt
atcgtgaaagctacctccctgtgcctggccgagaaggaagtatacacgcacgatgtactt
ggtagtgtgatgcagcagctagtggaaattgccccactgccaacactactcatgcgtacg
gtcatacagtcgcttacacttcatccccggctgtccgggttcgttacgaatttgctgcag
cgcctcatactgaagcaggtctggaagcagaaggtagtttgggacggatttctcaagtgt
gcccaacggcttacaccgcaaagcttgggcatactgatccagttgcccgcccagcaacta
caggacgccatcaccatttgtcccgagtttcgcgaaccaatgctggaacatgcgcgcgaa
atcatggagcaccagattgggcacgtgtcgcaacaggtgatggatgtgctgcttggcata
tcgccgtactctacgacagaatcatctgatctgcaaattgtgagcaactacactgacgat
gcaccgatgtcctcccatttgccagtaaaaataaagctagaaaaagatgttgatcctccg
gtcgccccgacaccagcacaaggcaaagagtaa
DBGET
integrated database retrieval system
