Anopheles funestus (African malaria mosquito): 125765878
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Entry
125765878 CDS
T09273
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein spellchecker 1-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
afun
Anopheles funestus (African malaria mosquito)
Pathway
afun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
125765878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afun03400
]
125765878
DNA repair and recombination proteins [BR:
afun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
125765878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
WASH-4_N
Motif
Other DBs
NCBI-GeneID:
125765878
NCBI-ProteinID:
XP_049287325
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Position
2:complement(58303331..58306805)
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AA seq
903 aa
AA seq
DB search
MSNLKPLQCLNLDKPQQRTFIEFFNTLGEKPASTVRIFDRSDYYSCHGADATLVAKILFK
STNVVKIMEIDDHQLPYISLSKNNFEGLIRELLLVRNYRIEVYTKSSKRKLENDWSIQYK
GSPGNLAHFEDVLFNNNNEMVSGSALIALHIRQELKQRMVGLGFIDVNERRMGVIEFVDD
DFCTELEALIVLLSPKECLLPNVTAEYERIGEIMKRNNVIITSRKAKEFMMDKAEVIESL
NKLLRFREGQQQNANTIPESSKTVAISALGVGLNYLELTNEIANHGQFQLTSLDSKRYVL
LDAAAVSALNLFPKPGISIKSSTYRWQSVLGVLDRCRTPQGHRLMAQWIKQPLRDYELIK
DRHDIVEYFVDNXSRAQLYDNHLKKLPDIMFVLKRLLRRKASLQDIFRLYQVTLRVPRML
SLLDVHNTGNVAVLNNIFNPIKDSLVDLKLFKAMVEQIIDLEAVEQGEYLVKADFDSQLQ
ERKQEMDDIHSKMKRHLSSVAKDIGLDAGSSIKLEFVSQHGFHFRITLKDETLIRKNNSY
RILDAIKGGVRFTTTKLQDYSESFATLKTAYEEQQQTIVSEVIRVAIGYTEPWTMLNNQI
AQLDCLLSFAVSASTAPTPYVRPKMLKDGPSVLKLSQIRHPCLELQEDVNFIANDAMFDA
NDASMYIITGPNMGGKSTYIRSVGVAVLMAHVGAFVSCESAEMSIVDCILGRVGADDNFT
KGLSTFMVEMIETAGIIRKASDKSLVIIDELGRGTSTYEGCGIAWSIAEWLAKESKCFTL
FATHFQEITDLATYVPNVKNCHMEAMVDGERMTLLYQVKPGVMEKSFGIQVAKLANFPPS
VIKLAEKFYNECEDHRGSLKEKQDTNGLAVLKTCFDEIDNFDSTNAVFSLSTDALQNLRS
LVN
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatttaaaacccttgcaatgtctcaacttagacaaaccacagcagagaacattc
atcgaattctttaatacattgggagagaaacctgctagtacggtgcgcatttttgaccga
tcggattattacagttgccatggcgcagatgcaactttggttgcaaaaatactgttcaaa
tctacgaacgtggtaaaaataatggaaattgatgatcaccaactgccctacatttcgttg
agtaaaaacaatttcgaaggccttataagagagctgcttcttgtccgcaattatcgtata
gaagtgtacacaaaatcatcgaaaaggaagctcgagaatgattggtcaattcaatacaaa
ggttctccaggcaatctggcccacttcgaagatgttttgtttaataacaataacgaaatg
gtcagcggatcggctctgattgctttgcacattcgtcaagaattgaaacagcggatggta
gggctgggctttatcgacgtcaacgaaaggcgaatgggtgtgatcgagtttgtcgacgat
gatttctgcactgagttggaggctctcatcgttttgctaagcccaaaggaatgtctgctt
cccaacgttacagcagagtatgagcgcatcggagaaataatgaagagaaacaatgttata
attacatctcgtaaagcgaaggaatttatgatggataaagctgaggttatcgaaagtttg
aataaattacttcgattccgggaaggccagcagcaaaatgcaaataccattcccgagtca
tcaaagacggtcgcgatcagtgcccttggtgtgggtttaaattatcttgaactaacaaat
gagatagctaatcacggccagttccagctgacatcgctcgattcaaaacgctacgttctt
ttggatgcggcagcagtatcggccttgaatctctttcctaaaccgggaatatcgattaaa
tcgagcacctatcgatggcagagtgtgcttggtgtacttgatcggtgtcgcacgccacag
ggtcatcggttgatggctcaatggataaaacaaccgttgcgagattatgagcttatcaaa
gatcgtcacgacattgtcgagtacttcgtcgataatnacagtcgtgcgcaactgtacgat
aatcacctgaagaagctgcctgatataatgttcgtgctaaaacgcctgttacgtcgcaag
gcttctttgcaggacattttccgtctgtaccaggtgacactacgtgtgccccggatgcta
agtctgctagatgtgcacaacacgggaaatgtagcagtgcttaacaatatattcaatccg
atcaaggatagcttggtagatttgaagcttttcaaggcaatggttgaacaaataatagat
ttggaagcggtcgaacagggcgaatatctggtaaaagctgatttcgatagtcagttgcag
gagcggaaacaggagatggacgatattcattccaaaatgaagcgtcacctttcttcggta
gcgaaagatatcgggctggatgctggatcgtccatcaagctggaatttgtaagccaacat
ggtttccatttccgtattacgctgaaggatgaaacattgatacggaaaaataattcttat
cgcattctggatgcgatcaagggtggcgtacggttcaccacaaccaaactgcaagactat
agtgaatcatttgctacattgaagactgcttatgaagaacaacagcaaacaatagtttcc
gaggtgatacgagtggctataggatacacagaaccttggacgatgcttaacaatcagata
gcacagctagattgtttgttaagtttcgccgttagcgcctcaactgcaccgacaccttat
gtacgacccaaaatgcttaaagatgggccaagtgtattgaaactttcccaaattcgccac
ccgtgtctcgaacttcaagaagatgtaaactttatcgctaacgatgcaatgttcgatgca
aacgatgcatccatgtacattattaccggaccaaacatgggaggcaaaagcacctacata
aggtcggttggtgttgcggtactgatggcacatgtcggcgcatttgtatcgtgcgaaagt
gcagaaatgtccatcgtcgattgcatcctgggtcgggtcggtgcggatgataattttacg
aaagggcttagtacgtttatggtagaaatgatcgaaacagccggaattattcgtaaagca
agcgataaatcgcttgttattatcgatgagcttggacgcggcacatcaacttacgaggga
tgcggtatcgcatggtctattgctgagtggttagcgaaggaaagcaaatgcttcactcta
ttcgccacgcacttccaagaaataactgacctagccacgtacgtaccgaatgttaaaaat
tgtcacatggaagcaatggtcgacggagaacgaatgacattattgtaccaggtaaagccg
ggtgtgatggagaagagtttcggtatacaggtcgccaaactagccaactttcctccgagt
gtcattaagcttgctgaaaaattctacaacgagtgtgaagatcatcgaggatcgcttaaa
gaaaaacaggataccaacgggttggcagtgttaaaaacgtgttttgatgagatcgataat
tttgattctaccaatgccgtcttttctttgtctaccgatgcattgcaaaatctacgatca
ttggtgaattga
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