Anopheles funestus (African malaria mosquito): 125765992
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Entry
125765992 CDS
T09273
Name
(RefSeq) regulator of nonsense transcripts 2-like isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
afun
Anopheles funestus (African malaria mosquito)
Pathway
afun03013
Nucleocytoplasmic transport
afun03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
afun00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125765992
03015 mRNA surveillance pathway
125765992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afun03019
]
125765992
Messenger RNA biogenesis [BR:
afun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
125765992
mRNA cycle factors
P-body specific factors
125765992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
125765992
NCBI-ProteinID:
XP_049287526
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All DBs
Position
X:complement(9959140..9967736)
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AA seq
1243 aa
AA seq
DB search
MADSEDEDFSSDEEIAMTDDEGTNSDEEFAIESFVIAIQDRYKRKAKERQQNQAPKRPRE
TDFFRYDSSLKKTTAFVQRLKQFNAQKLPSLMQDVSKLNLTKYISKISAVLVEANLKMSD
IGAVLTLCNHLHRHYADFAPTLFENWQKLLLIKPGEKVANPSKMRVDLRFYAELISMGIF
SNKTGLPLLGACLTGLITQDKEEHVNLSIVLSFCKHCGDEYAGLVPTRISELAKKHDMTM
PVSPLLPPDRQSNLRNLLRDYYQSLAEHLRSEHRQLQLAEKSRRKMLQSKGEVTTEKREQ
LAQLQASYEKLHASTSALADLLGEAMPQLEELQETGPPSEGSVLDGRAGEELQFGNLDPW
RDEETKSFYVDLPDLRQFLPNYCDKKQPGGEGDNPQQQQQQQDDEEDIEDTGELVPNMLA
GPPITEETLDMDMPELDGDLSYSESTSSLQDEEDAVAAVDQEVAEEETLKDGANLGGVGV
GGGNGTPSNHGNRRYFEQFVQNLQNCVNRELIDNAAIDFLLNLNTKSKRKRLVKVLFGVQ
RTRLDLLPMYARFVAIIDLVSPDVAHELCQMLKIDFKYHLKKKDQINIETKIKVVRYIGE
LVKFGIYKKLEALYCLRCLLHSFQHHNVEMTCAFLEVCGVYLYNCPDSRMRTNAFLEQMM
RLKMNTTMLDRYVQQVENVYYLVKRPEGLKVARKERPLIHTYIRQLIFKELDKANVDKMI
QLLRRLNWDDVGTFNYAVRCLSRAYNIRYHLIRSLADLLAGLNSYQERAVIHVIDTVLED
IRAGLEIHDNKLAQRRVAMVKYLGELYNYQLVDSDNILNTLYSIISFGVSLSHDGPPSIV
DPPESLFRLKLACVLLDTCGQYFTTGENRRRLDYFLVFFQRYYWYKKSHPYFTGSNAGGV
GAANNDEKSVPGARLNVKDLFPILMDHMYRECLKSLRPKLKLYASFEQAKEAVNSLRQKI
FPVEELERVNQDQEQSNGQHSQRTTSDAPESSDHEDSLQSDECTSDAGDDISEGYGTKRS
NGKRHTMDDEDDDTPSPPMEGVDQELEGYDEDDEEDDNDEDNEFYGDDRDCELEVVSEPP
PQKQPEDLEFEREFERMASEYCQQRAKDSAKVNPKHVPIPITFRNETKKTYDQLQEPTNV
KSDTVPFALMIRGKGKQQLYKTFEAPEDSSLAQYIREQERKLQEEKDSVKRLTLNISERL
EEEDYQESLNQPSRTSDPLRMRPLKPAKFKHPKGVPDIDAIFH
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggccgatagtgaagatgaagattttagctccgacgaggagattgcaatgaccgatgat
gaaggcactaattccgatgaggagtttgcaattgaatctttcgtcatcgccattcaggac
cgttacaagcggaaggcaaaagagcgccaacagaaccaagcaccaaaacgcccaagggag
acagatttcttccgatatgactcgagtttgaagaaaacgacggcgtttgtacagcggctg
aaacaattcaacgcccagaaattgccatcactgatgcaggacgtgtctaaattgaatctg
acgaaatacatctcgaagataagcgctgtactggtggaagctaatctgaagatgagcgac
atcggggctgtgctgacgctgtgcaatcatctgcatcggcactatgccgactttgcgcca
acgctgtttgagaactggcagaagttgctgttgattaaaccgggtgagaaggtggcaaat
ccgagcaagatgcgtgtcgatttgcgattttatgcggaactgatcagcatgggcatcttt
tccaacaagacgggtctgccgctactcggtgcgtgccttaccgggctgattacacaggat
aaggaggaacacgtgaatctgtcaatagtgctatcgttctgcaagcactgcggcgatgag
tatgccggcttagtgccaacacgaatatctgagttggcaaagaagcacgatatgacaatg
ccggtatcaccgttgctaccaccggatcggcaaagcaatttgcgaaatttgttgcgcgat
tattaccagtcgttagcagaacatttgcgatcggagcaccggcagctacagctggcggag
aaatcgcgacgcaagatgctgcagtcaaagggtgaggtaacgacagagaagcgtgagcag
ttggcccagctgcaggcatcgtacgagaaactgcacgcatcgacgagcgcgctggccgat
ctgctcggtgaagctatgccacagctggaagagctgcaggaaacgggaccaccgagcgaa
gggtccgtactggatggacgggccggtgaggagttacaatttggcaacctggatccgtgg
cgagacgaggaaacgaaatcattttatgttgatctacccgatctccgccagtttctacca
aactactgcgataaaaagcaaccgggcggggaaggagacaatccgcagcagcagcaacag
caacaggacgatgaagaagacattgaggatacgggtgagctggtaccaaatatgttggcc
ggtccccctattacagaggaaacgctcgacatggacatgccggagctggacggggatctc
agctattcggaatccacatcatcactgcaggacgaggaagatgcggtagcggcagtggat
caggaagtggcggaagaagaaacattgaaagatggagcgaatttaggaggcgttggcgtc
ggcggtggaaacggcacaccgagtaaccatggcaaccggcgctatttcgagcaatttgtg
caaaatctgcaaaactgcgtaaaccgcgagctgatcgataacgcggcgatcgacttcctg
ctgaatctgaatacgaaaagcaaacggaagcgattggtaaaggtactgttcggagtgcaa
cgcacccgactcgatttgttgccgatgtacgcgcgttttgtcgctatcatcgatctagta
tcgcccgacgtagcccacgagctatgccagatgctgaagattgatttcaagtaccatctg
aagaaaaaggaccaaatcaacatcgagacgaagatcaaggtagtgcgttacattggcgag
ttggtaaagtttggcatttacaagaaactggaagcgttgtattgtttacgctgtttgctg
cacagtttccagcatcacaacgtcgagatgacgtgtgcgtttctggaggtgtgcggcgtt
tatctatacaactgcccggatagccgtatgcgcaccaacgcgttcctcgagcaaatgatg
cgactaaagatgaacaccacgatgcttgaccggtacgtgcagcaggtggagaatgtctac
tatctagtaaaaaggccggaaggtttgaaggtagcacgaaaggaacgtcccctcatccat
acctacattcggcagcttatatttaaagagctggataaagcaaacgtggacaaaatgata
caactgttgcgccgcctgaactgggacgatgtgggcacattcaactatgccgttcggtgt
ctgtctcgtgcgtataatatccgatatcatctgatacgcagtctagcggacttgctggct
ggtttaaactcgtaccaggaacgggccgtaatccatgttatcgatacggtgctggaagac
atacgggccgggttggagatacacgataacaagctagcacagcggcgcgtagcgatggta
aagtacttgggcgagctgtacaactaccagctggtcgattcggataacattcttaacacg
ctgtactcgatcatttcgttcggcgttagcctttcgcatgatggaccaccgtcgattgtc
gatccaccggaatcgttgttccggctgaagctggcatgtgtgctgttggatacgtgtggg
cagtacttcaccaccggtgagaaccgtcgtcgactggattactttctcgttttcttccag
cggtactactggtacaagaaatcccacccgtactttacgggcagtaacgctggtggagtt
ggagccgcgaataacgatgaaaagtccgtccctggcgctaggctgaacgtgaaagattta
tttccaattcttatggatcacatgtaccgagagtgtttgaagagtttgcgaccgaaattg
aaattatacgccagttttgagcaggcaaaggaagcagtcaactcgttgcgtcagaagatc
ttcccggtggaggagctggaacgtgtgaaccaggatcaggagcagtctaatgggcagcac
agccagcgaacgacgagcgatgcaccggaatcatccgatcatgaagattcgctgcaatcg
gacgaatgtacgtcggatgcgggtgatgacatttccgaaggttacggaacgaagcgatcg
aacgggaagcggcacacgatggatgacgaggatgacgatacgccttcgccaccgatggag
ggcgttgaccaggaactcgagggatacgatgaggatgatgaggaagatgataatgatgag
gataacgaattttacggcgatgatcgggactgtgaactggaggtggtgtccgaaccaccg
ccacagaagcaaccggaggatctcgagtttgagcgggagtttgagcggatggcctcggag
tactgtcagcagcgtgcgaaggattcggctaaagtcaatcccaagcatgtcccgattcca
attacttttcgcaacgagacgaagaaaacgtacgaccagctgcaggaacctacaaacgtt
aaatccgacaccgtaccgttcgcgctgatgatacgcggaaagggcaagcagcagctgtac
aaaacgttcgaagcaccggaggatagttcgctggcgcagtacatacgggaacaggagcgg
aagctacaggaggagaaggacagtgtcaaacggttgacgctgaatatctcggaacggctc
gaggaagaggactaccaggagtcgctgaatcaaccgtcacgcacgtcggatccgttgcgt
atgcgaccactgaaaccggccaagtttaaacatccgaagggtgtacccgatatcgatgcc
atctttcattga
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