Anopheles funestus (African malaria mosquito): 125766882
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Entry
125766882 CDS
T09273
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
afun
Anopheles funestus (African malaria mosquito)
Pathway
afun03022
Basal transcription factors
afun03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
afun00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125766882
09124 Replication and repair
03420 Nucleotide excision repair
125766882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afun03021
]
125766882
03400 DNA repair and recombination proteins [BR:
afun03400
]
125766882
Transcription machinery [BR:
afun03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
125766882
DNA repair and recombination proteins [BR:
afun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
125766882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
DDE_Tnp_ISL3
Motif
Other DBs
NCBI-GeneID:
125766882
NCBI-ProteinID:
XP_049288920
LinkDB
All DBs
Position
3:63544753..63549496
Genome browser
AA seq
636 aa
AA seq
DB search
MTTTREDVLLQMGEVRFKKGDGTLYVMNERIAWIAEHRDTVAVSHRFQDIKMQKISPEGK
PKVQLQVVLHDGNSSTFHFVNRLGPQAQMADRDKVKELLQQLLPNFRRKIDKELEEKNRI
LTENPSLLQLYKDLVITQVLTSEEFWARHAKDYMNKEQTVKQDIGVSGAFLADIKPQTDG
CNGLRYNLTADIIECIFKTYPAVKRKHTEHVPAKMTEAEFWTKFFQSHYFHRDRIVAGGT
KDIFTECGKIDDQQLRQSVQENLGDPLLDIRAFEDNTLEDGFCSSATAKQQTVNSGNIVH
QSMIKRFNQHSFSVLKTCTDVKTLNCGIGSILSATPVNDSSTNGATVTANGKANSNNSSQ
PTDGSNNNNNTVNGYSKKEKRTHDQQQQHLANGGTTMEHKSNGTSTGANGAFVEPTMKKA
RIQAKITYDDLEGEEDERTRVKQLNLTKIERYLHGPVPAGGSGHDSSLSTNQHGEGSASL
HDFETTHAMILEAANGTWSNRTPHKLLVSPAAAVSALGDLSPGGALMRGFQEQSLAQLVP
PDIEKEVRNLYLSLLELLKEFWKCFPPTTPQLESEATRMHDILQRFAMVKLKPFEDRAMR
ELLPLGSSLTQHLNQLLQSANRKYAIWQDRHRRTHR
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgactaccacacgggaggacgtattgcttcagatgggagaagttcggtttaagaagggc
gatgggacgctttacgtgatgaacgaacgaatcgcatggattgctgagcatcgcgacacc
gttgcagtatcacatcgtttccaggatattaaaatgcaaaaaatttcacccgaaggtaaa
ccgaaggtacagctccaggtcgtactgcacgatggcaacagttcgacgtttcacttcgtt
aaccggctcggaccgcaggcacagatggccgaccgtgataaggtgaaggagctgttgcaa
cagctgctgccaaactttcgacgcaagatcgacaaggagctggaggaaaagaatcgcatc
ctgacggagaatccgtcactgttgcagctgtacaaagatctggtcataacgcaggtgttg
acgagcgaagagttttgggcccgccatgccaaggattacatgaacaaggagcaaacggta
aagcaagatatcggtgtgtctggtgcgtttctggccgacatcaaaccgcaaacggatggg
tgcaatggattgcggtacaatctaacagccgacattatcgaatgcatcttcaaaacgtat
ccggctgtgaagcgaaaacacaccgagcatgtgccggccaagatgaccgaggccgagttt
tggacaaagttttttcaatcgcactacttccatcgggaccgtatcgtggcgggcggcacc
aaagatattttcaccgagtgcggtaagatcgacgatcagcagctgcgccaatcggtgcag
gagaatctcggcgatccgctgctggatatacgggcgttcgaagataatacgcttgaggat
ggattttgcagttcggccactgccaagcagcagacggtaaacagtggcaacatcgtgcat
cagagcatgatcaagcgttttaatcaacattcattttccgtgctaaaaacatgtaccgat
gtgaaaacgttaaactgtggcatcggttccatactgtccgctacaccggtcaatgattca
tccaccaacggtgcgacggttactgccaacgggaaagcgaatagcaacaacagctcacag
ccgaccgatggaagtaacaacaacaacaacacggtgaatggatacagcaagaaagagaaa
agaacgcacgatcagcagcagcagcaccttgcgaacggtgggaccacaatggagcacaag
agtaatgggaccagcacgggagcgaacggggcgtttgtcgagccgacgatgaagaaggct
cggattcaagcgaaaattacctacgacgatctggaaggtgaagaggatgagcggacgcgt
gtgaagcagctgaatttgaccaaaatcgaacgttaccttcatgggccggtaccggccggt
ggtagtggtcacgattcatcactgtccaccaatcagcatggggaagggtcggccagtttg
catgatttcgaaacgactcatgcaatgatcctagaggcggccaatgggacgtggagtaat
cgaacgccccataagctgctggtcagtccggctgctgcagtcagtgcgctcggcgatctc
agcccgggtggtgcgctcatgagaggattccaggaacaaagccttgcccaacttgtgcct
ccggatatagagaaggaagtgcgtaacctttatctatcgttgctggaattgctgaaggag
ttttggaaatgtttcccaccaactacgccacagctagagtcggaggcaacccgcatgcac
gatatattgcaacgcttcgcgatggtcaaattgaaaccctttgaggatcgtgccatgaga
gaactgttgccattgggttcctcgctaacgcagcatttgaatcaattgctccagtcggcc
aatcggaagtacgcgatttggcaggatcggcatcgtcgtacgcacaggtag
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integrated database retrieval system
