Anopheles funestus (African malaria mosquito): 125767334
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Entry
125767334 CDS
T09273
Name
(RefSeq) polyadenylate-binding protein 1-A
KO
K13126
polyadenylate-binding protein
Organism
afun
Anopheles funestus (African malaria mosquito)
Pathway
afun03015
mRNA surveillance pathway
afun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afun00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125767334
09123 Folding, sorting and degradation
03018 RNA degradation
125767334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afun03019
]
125767334
03041 Spliceosome [BR:
afun03041
]
125767334
Messenger RNA biogenesis [BR:
afun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125767334
mRNA cycle factors
Stress granule specific factors
125767334
Spliceosome [BR:
afun03041
]
Complex C
Other components
Complex C specific factors
125767334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_7
RBD_DEAH11
RRM_10
RRM_RdRP1_2
RRM_occluded
Nup35_RRM_2
RRM_3
RRM_MARF1
POP1_C
RRM_8
Motif
Other DBs
NCBI-GeneID:
125767334
NCBI-ProteinID:
XP_049289770
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All DBs
Position
3RL:complement(62956929..62958708)
Genome browser
AA seq
511 aa
AA seq
DB search
MNFDPIKGRPIRIIQLDRELNQLSSKAVVSKLRPEARIWEARPSREIPRSALSCGYSTQS
GPLSKKFGGTWSKVFVKNLDKKIDNKAMYDTFSAFGNILSCEIAQDEKGQSKGYGFVHFE
TEESANNSIDKVNGKLLNEKKVYVGRFISRKEREKELGEKAKLFTNVYVKNFSEDLTEEA
LRDMFEKYGPITSHRVMTKEGKSRGFGFVAFESPEAAERAVQELNNKELADGKMLYVGRA
QKKNERQMELKRQCEQPKMERLTRYHGVNLYVKNLDDTIDDERLRKEFAPYGTITSANVM
LDEGRSKGYGFVCFSAPDEATKAITEMNGRVVGSKPLYVALAQRKEERKSHLASQYIQRV
NSLRMQHIGQVYQQSDSYFMPTITQPQRFYGPQVAPQLAAGQTRAPNYRFTRSMRNPQLV
AQQAVIVKEPLTASMLAAAQPAEQEQMLGERLFPLIEQMYPTLAGKITGMLLEIDNSELL
HMLEHKESLTAKAEEAVAVLQAHHMTSAQPN
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgatccgattaagggacgcccgatccgtatcatccaattggatcgagaacta
aatcagttatcgtctaaagcagtggtctccaaactacggcccgaggcccgcatatgggaa
gcgaggccctcccgagagatcccgagatcagccctcagctgtggctattccactcaaagc
ggcccgctatctaaaaagtttggaggcacctggtctaaagtattcgtaaagaatctggat
aaaaaaatcgacaacaaggcgatgtacgatacgttctcggcattcggcaatatcctaagc
tgcgagatagcacaggacgaaaaaggccagagcaagggttacggtttcgtgcacttcgag
acggaggaatcggctaacaattccatcgacaaagtaaacggcaaattgctgaacgaaaag
aaagtgtacgtcggccgattcatctcgcgcaaggagcgcgagaaggaactgggcgagaag
gccaagctgttcacgaatgtgtacgtcaaaaactttagcgaagatctgaccgaggaggcg
ctccgtgacatgtttgaaaagtacggtcccatcacaagccaccgcgtgatgacgaaggaa
ggcaagagtcgtggattcggctttgtcgctttcgaaagcccggaagctgccgaaagagcg
gttcaggagttgaacaacaaggaactggccgatggaaagatgctatatgtcggtcgtgcc
cagaaaaagaacgagcgccaaatggagctgaaacgccagtgcgagcagcccaagatggag
cgcctgacacgttatcatggtgtgaacctgtacgtgaagaatctggacgatacgattgac
gatgagcgactgcgcaaggaattcgccccgtacggcacgatcacatcggccaatgttatg
ttggatgaaggccgctcgaaggggtacggtttcgtgtgcttctcagcacccgatgaggct
acaaaggcaattactgaaatgaatggccgcgtggtgggtagtaagccgctgtacgtcgcg
cttgcccagcgtaaggaggagcgtaaatcgcacctggcgagccagtacatccagcgtgtg
aatagtctgcgcatgcagcacattggtcaagtgtaccaacagagtgacagctacttcatg
cctaccattactcagcctcagcgcttctacggaccgcaggttgcgccacagctggctgct
ggacaaacgcgtgcaccaaactacaggtttactcggtcgatgcgcaacccacagctcgtt
gctcagcaagctgtcattgttaaagaaccacttactgccagcatgttggctgctgctcaa
ccggctgaacaggaacagatgcttggagagcgtctgttcccgcttattgaacagatgtat
ccgacactcgccggtaaaatcaccggaatgttgctcgagattgacaactcggaactgttg
cacatgctggagcacaaggaatcgctgacagcgaaggctgaggaagctgtggctgtgctg
caggcacatcacatgacttcggcacagcctaactaa
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