Anopheles funestus (African malaria mosquito): 125768124
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Entry
125768124 CDS
T09273
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
afun
Anopheles funestus (African malaria mosquito)
Pathway
afun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125768124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afun03019
]
125768124
Enzymes [BR:
afun01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
125768124
Messenger RNA biogenesis [BR:
afun03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
125768124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
Motif
Other DBs
NCBI-GeneID:
125768124
NCBI-ProteinID:
XP_049291328
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All DBs
Position
3:11136563..11139117
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AA seq
609 aa
AA seq
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MDITKKNFIEQLPLIRETIRNATFFAMDCEFTGLASDRTIFPFDTPEEVYLKMVENSAQY
IIIQFGLCAFRVEPPAEEQKDAEPRLSYKCYNFFCYPKGRTNVFSCQGESIRFLADNGFD
FNRLFREGLSYANEIEEQRYRADLKERQAKRAATILAAAEDDSNESDSKAVETADINAVP
VPAELQQQVEDTAASIEQFLQSDRPELIVGNCNAFQRKLIYQLIEQRFLRKVTTSTVSLE
NNQKAIKVERKRSLEEEQALDEKRRAQENADLEVNVGISLVLQELSKARKLIIGHNMLLD
LFYVLRQFFKPLPADYEEFKKLTKEYFPLLLDTKYLCTNAEIKVDVNSSVLAHVYDAVSK
APFAIPTVHAELPDHQYSVDDEKKHEAGYDAYLTGLCFLGLVSRFKVNLLQLPKDTTLKH
YMNRIFITRLNDVNYIYLNGKEPSQSREHIFYVTFPENWRTTDIMSKFKPFGLVHVNWLD
NTSAFVSLHNRIVASSVLKTIGYHTGFKVYSFAQFTQMKLQRPATKRGRIGTGGPGRGNG
AEVRCGQPVDKPSGEEKAEEERQKIDDSVTSAKRKGKHEDQPPADNEADGGGWRTVKKAR
KTFTDNNDW
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggatattaccaagaaaaatttcatcgagcaacttccattgattcgggaaacaatccgc
aatgcaacgtttttcgctatggattgcgaattcaccggactggcgtccgatcgtaccata
tttcccttcgatacaccagaagaggtgtatttgaaaatggtcgaaaatagcgcccagtat
attatcatacagtttggcctgtgtgccttccgtgttgaaccaccggcggaggagcaaaag
gacgccgagccacggttatcgtacaaatgttacaactttttctgctatcccaaaggtcgt
acgaacgtgttcagctgtcagggcgaaagtatacgctttctcgctgacaatgggttcgat
tttaatcgactgttccgtgaaggattgtcgtatgcaaacgaaatcgaagagcaaaggtac
agggctgacctgaaggagcgtcaagcaaagcgagcagccacaatactggcggcagccgag
gacgattcgaacgaatcggattccaaagcagttgaaacggcggacatcaatgcagtccca
gtgcctgcagagcttcagcaacaagtggaagatacagctgccagtattgagcagtttcta
cagtctgaccggccggaactcatcgtcggtaactgtaatgcattccagcgaaagctgatt
taccagttgatagaacagcgcttcttgcgtaaagtcactacctccaccgtatcgctagag
aacaatcagaaggccattaaggtggaacggaaacgttcactcgaggaagagcaggcactg
gatgagaagcgtcgggcacaagaaaatgcagatctcgaagtgaacgttggaatatcgctg
gtactgcaggagctgtcaaaggcacgcaagttaatcattggccacaacatgctgctcgat
ttgttttacgtgcttcgccagttctttaaaccactaccagcggactatgaggaatttaag
aagctcacgaaagaatatttcccacttcttctcgacactaagtacctgtgtacgaacgcc
gagattaaggtggacgttaactcgtccgtactggcgcacgtgtacgacgcggttagcaag
gcaccatttgcaattcccacggtacatgccgaactacccgaccatcagtacagcgtggac
gatgagaaaaagcacgaagctggttacgatgcgtaccttaccgggctttgcttcctagga
cttgtcagtcggttcaaggttaatctacttcaacttccgaaggacaccacgttgaaacat
tacatgaatcgaattttcattacccggctaaatgatgtcaactacatttatctaaatgga
aaagaaccgtcacaatcacgggagcacattttctacgttactttcccggaaaattggcga
accactgatattatgagcaagtttaaaccgttcggtctggtacatgtcaactggctggat
aatacttccgcatttgtgtcgttgcacaatcgaatcgttgcgagttcggtgctgaaaaca
atcggataccacaccggcttcaaagtgtacagctttgcacagttcacgcaaatgaaactg
caacgccctgctactaaacgaggacgaatcggtacgggtggtcctggcagaggaaatgga
gcagaagttcgatgcggacaaccagtcgataagccgagcggggaagaaaaagcagaagaa
gaaagacaaaaaatagatgactctgtaacctccgctaagcggaagggcaagcatgaggat
caaccaccggcagacaacgaagccgacggtggtgggtggagaaccgttaaaaaggctcgc
aaaacgttcaccgacaacaatgattggtaa
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