Anopheles funestus (African malaria mosquito): 125768335
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Entry
125768335 CDS
T09273
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
afun
Anopheles funestus (African malaria mosquito)
Pathway
afun03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
afun00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125768335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afun03021
]
125768335
Enzymes [BR:
afun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125768335
Transcription machinery [BR:
afun03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
125768335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
125768335
NCBI-ProteinID:
XP_049291759
LinkDB
All DBs
Position
3:complement(60372153..60378021)
Genome browser
AA seq
1717 aa
AA seq
DB search
MTIINLDPTNLEFSIFTAEDIRKISVLAVTQARSFDEMGNAIRDGLYDPALGPSGHGEIC
ATCTRDLNMCEGHFGHIELAVDVYNPFFQRTVANILRICCMACARLQMNDGEKSLLELQL
RLADAGYIVEAEEIDLYKAKLQANANEPIPEEVIYYENLLRNEPYNKLGNTKLSSTIREA
IVNAAFRVDNKKCKHCEKILQRVVVSDKRITIRWTQADKKTFYEEKGTDKPTEEQKKASS
TVMIANDSKQFLRKLYANDGTLLSLLLPVLSTKKENPTDMFFMEVVPVTPIKTRPVRRSS
RTPGRIMQVEHAQSLSLRNILLANSTVRAVMFITNPTQYPNVSQAVHDHMQSICTYAKGD
TLTAKFYHGWAELQTAVDHLLDVEKLTIGGKQAISFGLKQLLEKKNGLIRMNMMGKRVNH
AARTVITPDPYIGIEEIGIPTRFAKKLTYPVPVTPWNVAELRRWVLNGPDVYPGANMIED
ANGRVSKISSSNVTQRESMAKTLLTPHEAGGDVSVADSIKIVHRHLQNGDVLLLNRQPTL
HRPSIMAHRAKILGGEKIFRLHYSNCKSYNADFDGDEMNAHLPQNEVARAEAFGLVAVPY
QYLVPKDGTPLGGLIQDHIVSAVKLFIRGKFFNREDYQQLVFQALNNKKGNIDLLPPSIL
KPVRLWSGKQIISTIIKNSTPKGKPYINMIGKSKLSSKHWRVLPAREWKYGGTPLEENEL
SESEVFIRQGELLCGILDKNHFGATPYGLIHCMYELYGGVCSTALLSSLSRLFTYYLQWE
GFTLGVRDILVRSKADRKRAKIVRECREQAGHEAAAAALDLPSSVSREVLAKHLREAYAK
NPNFRAIIDRKYKTALDTFTNRINNACLPDGLISKFPENNLQLMVQSGAKGSTVNTMQIS
CLLGQIELEGKRPPLMLSGRSLPSFADFETSPKSGGFIDGRFMTGIQPQDFFFHCMAGRE
GLIDTAVKTSRSGYLQRCLVKHLEGLSVHYDMTVRDSDGSVIQYMYGEDGMDIGKTQFIA
NEKQTRFLDMNHGVIVQQDVVKRLQTANDEDPLNEALRKHVKKMKRWTKQNGGHSSTLLK
SRTSPFALFTAENAEALRVDLANADKVKKSGRTKLTEKLIKRWKKLDPAVKHDYVKRAAH
CPDPVAAAFSPDAHFGVLSEKLNELMMKYKRTQKPIHNIEELMQVKGSEAFAAPGEPVGV
LAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMFGASNIKTPTMEIPFLPHRK
PERLKAVADKLRKSLNRVTVADVLENINVKSKLAVTPSRVTIYTFRFNFLPPDAYDQDYC
VTPASIIRHMSRKFFRAMFSAIRRDEATKNNLIETETKGKSNENNEDEALDEREPLKQER
HETAAFSDSDSESDDGLPAADADASEAKIKGKTTDEHGYDDEKDENSSDSSDEEKEADEA
MDGKSSEKQKDTKSSPQGLEEALIEEYEKDQEKMEQELLEQTPTGSGCVIEKEEAEYMKH
LNSKVNMYQIDRVDYRWCQVVLHMPLKLKEIDFTKVFREVAAKSVIWEVPNIKRAITYMQ
NDQLYLKTEGTNMSAMTAQAKVLDLNRLYTNDIHAMAKRYGIEAAARVAVKEIQNVFGVY
GITVDPRHLLLVADYMTAGGKFLAMNRIAMEYNASPLQQISFETSLKFLRDALMKGKSDR
LESPSSRLIVGQPCRVGTGAFTLYSSALQDYFDTTKV
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcattaatcttgatccaacgaatttggagttttccatatttacggcggaagac
ataagaaagatcagcgtgttggcagtgacacaggcacgttcgttcgatgaaatgggcaat
gcgatccgggatggtctgtatgatcccgccctaggccctagcgggcatggcgaaatctgt
gccacttgtactcgcgatctgaacatgtgcgaaggacacttcggacacatcgaactcgct
gtggacgtgtacaatccgttcttccaacgtacggtagccaatatactccgcatctgctgc
atggcgtgtgcgcgcctgcaaatgaatgatggagaaaaatcgctacttgagctacagttg
cgtctagcggatgctggttacatcgtcgaagcggaagagatcgatttgtacaaagcgaaa
ctgcaagcaaacgcgaatgaacctatcccggaggaggtgatttattacgagaatttgttg
cgaaatgaaccctacaacaagctgggcaatacgaaactatccagcactattcgggaggca
atagtgaacgctgcgtttcgcgtggacaataaaaagtgcaagcactgtgagaagattttg
caaagggtcgtagtgtcggacaaaaggataacgatacgttggacgcaggcggataaaaaa
acgttttatgaggaaaagggaacggataaacccaccgaggagcaaaaaaaagcgtcatct
acggtgatgattgctaacgatagtaagcagtttctccggaagctatacgcgaatgatggt
acgctgttgagccttctgttgccggtactgtccacaaaaaaggaaaatcctactgatatg
ttcttcatggaagtggtacctgtgacaccgataaaaacgcgccctgtccgccgttcttcg
cgcacaccaggacgcatcatgcaggttgagcacgcgcagtcattgtcgttgcgaaacatt
ctgcttgcaaactcgaccgtgcgtgccgttatgtttatcaccaacccgacacagtacccg
aatgtatcgcaagcggtacacgatcatatgcaatccatttgcacgtacgccaaaggcgat
acgctgaccgcgaagttttatcatggctgggcggaactgcagacggcggtcgaccatctg
ctggatgtggagaaacttaccatcggcggcaagcaggccatttcgttcggtttgaagcag
ctacttgagaagaagaacgggctgatacgcatgaacatgatgggcaaacgggtgaaccat
gccgcccgtaccgtgatcacacccgatccgtacatcggtatagaggagatcggcataccg
acccggtttgcgaagaagcttacctatcccgtacccgtcacgccgtggaacgtggccgag
ttgcgccgctgggtattgaacgggccggacgtttatccgggcgcaaacatgatcgaagat
gcgaacggacgggtaagcaaaatttcatcctccaacgtgacgcagcgtgaatcgatggcc
aaaacgttgctcacaccgcacgaagccggcggtgatgtgagtgtagccgattcaatcaaa
atcgtccatcggcatctgcagaacggcgatgtgctgctgcttaaccggcagcctacactg
catcggccaagtataatggcgcaccgggccaagatcctaggtggggagaaaatttttcgc
ctccactactcgaactgcaaatcgtacaatgccgatttcgatggggacgaaatgaatgcc
catttgccacagaatgaggtggcacgggcagaggcgttcgggttggtagccgtaccttat
cagtatctcgtcccaaaagacggtacaccgctcggtggtttgattcaggatcatatcgtg
tcagccgtgaagcttttcattcgcggaaagtttttcaatcgcgaggattatcagcagctg
gtgtttcaagcgctgaacaacaagaagggcaatatagatctgttgcccccctcgattttg
aagccggtgagactatggtccggaaagcagatcatttcgaccatcatcaagaacagcacg
ccgaaggggaagccctacattaacatgattggaaaatcaaagcttagcagcaagcattgg
cgagtattaccggcccgcgaatggaaatacggtggtacaccgcttgaagagaacgaactg
tccgaatcggaagtgttcatccgccagggcgaactgctgtgcggcatcctcgacaagaac
catttcggtgctacaccgtacggtttgattcactgcatgtacgaactgtacggtggcgtt
tgttccacggcactgctttcctcgttgtctcggctcttcacctactacctccagtgggag
ggttttacgctcggcgtgcgtgacattttggtacgctcgaaggcggatagaaagcgtgcg
aaaattgttcgcgaatgtcgcgaacaggcaggacacgaagcagccgccgctgcccttgat
ctaccgtcgagcgtttcgcgcgaagtgcttgccaaacatttgcgggaagcgtacgccaag
aatccaaactttcgtgccattatcgatcgcaagtataaaaccgcactcgatacgttcaca
aatcggattaataatgcttgtcttccggatggtttgatcagcaagtttccggagaacaat
ctgcagcttatggtacagtccggtgcgaagggttcgactgtaaacacgatgcaaatctcc
tgcctgctcggtcagatcgaactcgaaggcaaacgtccaccgctcatgctgtcgggccgc
tcgttgccaagctttgccgactttgaaacctcgcccaaatcgggtggatttatagatgga
cgctttatgaccggcatacagccgcaagacttctttttccattgtatggcgggtcgcgaa
ggtttgatcgatacggcggtcaagactagccgttccggttatttgcagcgctgtctggtg
aagcatctggagggactttcggtgcattatgatatgacggtgcgggacagtgatggaagc
gtgatacagtacatgtacggcgaggacggtatggatattggtaaaacacagttcatcgcg
aacgagaagcaaacgcgctttctcgacatgaatcatggcgtgatcgtacagcaggacgtt
gtgaaacgtttgcaaaccgcaaacgatgaggatccgttgaacgaggcgctaagaaagcat
gtgaaaaaaatgaaacgctggacgaaacaaaacggtggccacagttcgacgttgctgaaa
agccgaacctctccgtttgcgctgtttacggccgaaaatgcggaagcgctccgggtcgat
cttgcgaatgcggataaggtgaaaaaatccggccgtaccaagctgacggaaaagctgatc
aaacggtggaaaaagctagatccggccgtaaagcacgactacgtaaaacgggccgcccac
tgtcccgatcccgtcgcggctgccttttctcccgatgcacattttggcgtgctgtccgaa
aagctcaacgagttgatgatgaagtacaagcgtacgcaaaagccaatccacaacatcgaa
gagttgatgcaggtaaagggaagtgaagcgtttgccgccccaggcgaaccggtcggtgtg
ttggcggcacagtcgatcggtgaaccatcgacacagatgacgcttaatacgttccatttt
gccggccgtggtgaaatgaacgttacgctcggtattccgcgtttgcgtgaaattctgatg
ttcggagcgtccaacattaaaacaccgacgatggaaattccatttctaccgcaccgtaaa
ccggagcggctgaaagcggttgcggacaagctgcgcaaatcgctcaaccgtgtcacggtg
gccgatgtgttggagaatattaacgtcaagtcgaaactggctgtaactccgtcgcgcgtt
acgatttacacgtttcgttttaacttccttccgccggacgcgtacgatcaggactattgc
gttacgcctgcgtcaatcatacgccatatgtcgcgtaaattcttccgagcaatgtttagc
gctattagaagagatgaagcaacgaaaaataatttaatcgaaaccgagacaaaagggaaa
tcaaatgaaaataacgaagacgaagcactagatgagagagaaccattaaaacaggaaagg
cacgaaacagctgcattttctgacagtgacagtgaatcggatgatggtttgccggcagcg
gatgccgatgcatcggaggcgaaaattaagggcaaaacaaccgatgagcatggttacgat
gatgaaaaggatgagaacagctcggattccagtgacgaggagaaggaagccgatgaagca
atggatgggaaatcgtcggaaaagcaaaaggacacgaaaagttcaccccaagggttggaa
gaggcgctcattgaggagtatgagaaggatcaggaaaagatggaacaagagctactggaa
caaacgccaaccggtagtgggtgcgtcatcgagaaggaggaggcagagtatatgaagcac
ctgaattccaaggttaatatgtaccaaatagatcgggtagactatcgctggtgtcaggtt
gtgctgcatatgcccttgaagctaaaggaaatcgattttaccaaggtgtttcgtgaggtg
gccgccaagtcggtcatatgggaggtaccgaacatcaagcgtgccatcacgtacatgcag
aacgatcagctgtacttgaaaaccgaaggcacaaatatgtccgcaatgacggcacaagcc
aaggtactagatttgaatcgactctacaccaacgacattcacgcgatggcgaaacggtac
ggaatcgaggcagcggcacgcgtcgcggtgaaggaaatacagaacgtgtttggcgtgtac
ggtatcacggtcgatccccggcatttgttgctagtggccgactatatgactgcaggcggc
aagtttctggcaatgaaccgtattgcgatggaatataacgcctcgccgttgcagcaaatt
tccttcgaaacgtcactcaaattcctgcgggatgcgttaatgaagggaaagagtgatcgt
ttggaatcgccctcttccaggctgatcgtgggtcaaccatgcagggttggcacgggtgca
ttcacgttgtattcatccgctctacaggattatttcgacacgacaaaggtgtaa
DBGET
integrated database retrieval system
