Anopheles funestus (African malaria mosquito): 125768500
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Entry
125768500 CDS
T09273
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
afun
Anopheles funestus (African malaria mosquito)
Pathway
afun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125768500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afun03041
]
125768500
03009 Ribosome biogenesis [BR:
afun03009
]
125768500
Enzymes [BR:
afun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125768500
Spliceosome [BR:
afun03041
]
Complex A
U2 snRNP components
U2 related factors
125768500
Complex B
125768500
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
125768500
Ribosome biogenesis [BR:
afun03009
]
Eukaryotic type
90S particles
Helicases
125768500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
nSTAND3
AAA_22
AAA_19
SRP54
Flavi_DEAD
AAA_25
ResIII
ABC_tran
TsaE
T2SSE
AAA_7
AAA_30
Motif
Other DBs
NCBI-GeneID:
125768500
NCBI-ProteinID:
XP_049292209
LinkDB
All DBs
Position
3:64511091..64514569
Genome browser
AA seq
743 aa
AA seq
DB search
MSKRRIEVMDPFIKRRREEKAAAEGSAAASSSKLDSGGSSNAGTSSASKAGTVAGAGGSE
AGGKNPLNGVAYSQNYYNLYKKRITLPVFEYKSDFMRLLSEHQCIVLVGETGSGKTTQIP
QWCVEYALQTSSKGVACTQPRRVAAMSVAQRVSEEMDVVLGQEVGYSIRFEDCSSPRTLL
KYMTDGMLLREGMSDPMLEAYQVILLDEAHERTLATDLLMGVLKEVIRQRKDLKLVVMSA
TLDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGDIL
MFLTGQEEIEEACKRVKREIDNLGPDVGELKCIPLYSTLPPHMQQKIFEPAPPKRSNGAI
GRKVVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRA
GRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAP
ETLMRALELLNYLAALDDDGNLTDLGAVMAEFPLDPQLAKMLIASCQHNCSNEILSITAM
LSVPQCFVRPNEMKKAADDAKMRFAHVDGDHLTLLNVYHAFKQNNEDQGWCYDNFINYRS
LKSADNVRQQLARIMDRFQLQRTSTDFTSREYYFNIRKALVQGFFMQVAHLERTKHYQTI
KDNQVVQLHPSTCLDHKPEWVIYNEFVLTTKNYIRTVTDVKPEWLLQIAPQYYDMNNFPL
CEAKRQLELILARMDSKQFQQGF
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcgacgcatcgaagtaatggatccattcatcaagagacgaagggaggagaaa
gcagcggcagaaggttccgccgctgcgagctcatcgaagctcgattccggtggctcatca
aatgcgggtacgagttctgcatcgaaggcaggaacggtggcgggtgctggcggctctgaa
gcgggaggaaagaacccgctgaacggcgtggcctacagtcagaactattacaatctgtac
aagaaacgcatcacgttgccggtattcgagtacaagtcggatttcatgcggttgctgtcg
gagcaccaatgtatcgtgctggtcggcgaaaccggatccggcaaaacaactcaaatacct
cagtggtgtgtcgagtacgcgcttcaaacgagctcgaaaggagtggcatgcacacagccc
cgacgagtagcagccatgtccgtggctcagcgcgtttcggaggaaatggacgtcgtgcta
gggcaggaggttggttatagcatccgtttcgaagactgttcgagtccgcgcacgctgcta
aagtacatgacggacggtatgttgttgcgggaaggcatgagcgatccgatgctcgaagcg
taccaggtcatactgctcgacgaagctcacgagcgaacgttggcaacggatttgttgatg
ggcgtgctaaaggaagtgattcgacagcggaaggatttgaagctggtcgtgatgtcggct
acactggacgcaggaaagttccagcagtacttcgacaatgcgccactgatgaatgtacct
ggccgtacacatccggtagagattttctacactccggaaccggaacgtgactatctggag
gcggcaatccgtaccgtcattcaaattcacatgtgcgaagagatcgagggtgacatcttg
atgttcttaaccgggcaggaagaaatcgaggaggcatgtaaacgcgtgaagcgcgaaatc
gacaatctcggtccggatgtgggtgagctgaagtgtataccactgtactcgacgctaccg
ccccacatgcagcagaaaattttcgaacccgcaccacccaaacggtcgaacggtgcgatc
gggcggaaggtggtcatatcgacgaacattgcagaaacgtcacttaccatcgatggtgtc
gtgtttgtgattgatccgggcttcagcaaacagaaggtatacaatccgcgcattcgcgtc
gaaagcttgctcgtatcgcccatcagtaaagcgtcggcccagcagcgtgcgggacgtgcc
ggtcgtacacggcccggtaaatgtttccgcctgtacacggagaaggcctataagacggag
atgcaggataatacatatcctgaaattttgcgttcaaatttgggtacggtggtgctgcag
ctgaagaagctcggtatcgatgatttggttcactttgattttatggacccgcccgcccca
gaaacgttgatgcgtgcgctagagctgctcaactatttggccgccctggatgatgatggc
aatctgacggatcttggtgcggtgatggcagaatttccgctcgatccacagcttgcgaaa
atgttaattgcaagctgtcagcacaactgttccaacgagattctgtccattacggcaatg
ttgtcagttccacagtgcttcgtgcgtccgaatgaaatgaaaaaagctgccgatgatgct
aagatgcgctttgcgcacgttgacggtgaccatctgacgctgttgaatgtataccatgct
tttaaacaaaataacgaagatcagggatggtgttacgataattttatcaattatcgttcg
ttaaaatcggccgacaatgtgagacaacagctggcccgcatcatggatcgcttccagttg
caacgcacgagtacagactttacatcgagagaatactattttaacattcgcaaagcattg
gtgcaaggtttcttcatgcaggttgctcatttggaacgtaccaagcattatcagacgata
aaggataaccaggtggtacagctgcatccgtccacttgtctcgaccacaaaccggaatgg
gtgatttacaatgaatttgtgctcacgacgaaaaactacatcagaactgtgactgatgtt
aagcccgaatggttgctgcagattgcaccacagtactacgatatgaataatttccctctg
tgcgaggcaaagcgtcagttggagctaatactggcccgcatggattcgaaacagtttcag
caaggattttaa
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