Anopheles funestus (African malaria mosquito): 125769834
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Entry
125769834 CDS
T09273
Name
(RefSeq) probable nucleoporin Nup54
KO
K14308
nuclear pore complex protein Nup54
Organism
afun
Anopheles funestus (African malaria mosquito)
Pathway
afun03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
afun00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125769834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afun03019
]
125769834
Messenger RNA biogenesis [BR:
afun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125769834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
PEARLI-4
ATG14
HEPN_Swt1
DUF1539
Motif
Other DBs
NCBI-GeneID:
125769834
NCBI-ProteinID:
XP_049294683
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All DBs
Position
3:complement(13516317..13520673)
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AA seq
624 aa
AA seq
DB search
MSFNFGNTSALGSTSTPTKPAFGNFSFGGQTSTPAFGATAATGAAPAFGQATATSAFGAA
AAPGFGAAAGTPAPGTSAFGTLGFGAATAGTTAFGAAPTSSAPSFGFGTNTATAAAPAFG
GFGTATSTAATGFGGFGATTATSASAPAFGGFGTATQPFGTSIATTSAPSFFGGLGSTQP
QASTGFGGFGTGNTFGGGGGTTFGQPGATTGGLNFGQSAFGQPQQQPQQQLAPALSPEEA
FVQSVFNVSIFGDERDTVISKWNYLQAMLGTGKSFYSHNAPPVEITPSNFLCRFKTMGYS
KLPGKDNKTGLVGLTVNKTVAQIKEQQQQFINSMNQIFGNKPNITIVVENVKSINDAKVQ
VIIYIEEKSTISNEIKRVLATEVASYLNQPMPKQQLTQLGIESVVALVLPEEDQLKEYLD
NPPKGIDPRMWEQAKIDNPDPKRFIPVPMIGFQDLKWRIKCQENETEIHASYLAKVEKEI
AELKQRHMNTTAKIAEHRRNFAELSHRILRVIVKQESTRKLGLALSPEEEAIRTKLENMH
ALVSTPTQFRGRLSELLSQMRMQRNQWAHGNFLNEYTLDKDATQEMQSFLTMQQKAVSFL
IDTIHKDMKTLKVITEGMTQLVQG
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcaattttggaaacacatcagcgctcggttcaacgagcacaccgaccaagccg
gcttttggcaatttctcattcggtggacaaacgtcaacaccagcgtttggagcgactgct
gcaactggtgcagctcccgcattcggtcaagctacagccacgtcggctttcggtgcagcg
gcagcacccgggtttggagcggccgcaggtactccagcacccggcacgagtgcgttcgga
acgttgggtttcggtgcggccacagctggaactacagcgttcggtgccgcaccaacaagc
tctgccccgtccttcggatttggaacaaatacggctacagcggccgcacctgcctttggt
gggtttggaactgccacctctactgctgcaacgggcttcggtggatttggggcaaccact
gccactagcgcgagtgctcctgcattcggtggctttggcacagcgacacaacccttcgga
acatcgattgcgaccacttcggcaccatccttcttcggtggacttggatccacgcaaccg
caagcgagcaccggtttcggtgggttcggtaccggtaatacctttggtggtggtggtggt
acgacttttggtcaaccgggcgctacaaccggtggcttaaactttggacaatcggccttc
ggtcagccacagcaacaaccgcagcaacaactcgctccagccctctcgcccgaggaagca
ttcgtccagtccgtcttcaatgtgtccatctttggtgatgaacgggacacagttatttcg
aaatggaactacctgcaggctatgctcgggacaggcaaatcgttctactcgcacaatgca
ccaccggttgagatcaccccatcgaactttctgtgccgattcaagacaatgggctacagt
aaactgcccgggaaggacaacaaaaccggactggtgggtctgacggtcaacaaaactgtg
gcacaaataaaggaacagcaacagcagttcatcaacagcatgaaccaaatatttggcaac
aaaccgaacattacgatcgtggtggaaaacgttaaatccatcaacgacgcgaaggtgcag
gtaataatctacatcgaggaaaagtcaaccatctcgaacgagataaagcgcgtactggca
acggaagtggccagctatctgaatcaaccgatgcctaagcagcagcttactcagctcggt
attgaatcggtcgttgcattggtgctgccggaggaagatcaactgaaggagtatcttgac
aacccaccgaagggcatcgatccgcgcatgtgggaacaggcaaagatcgataatcccgac
ccgaagcgtttcattccagtgccgatgattggctttcaggatcttaagtggcgtataaag
tgtcaggagaatgaaaccgaaattcacgcatcgtaccttgccaaggtggagaaggagatc
gccgagctgaagcagcgtcacatgaacacgaccgccaagattgccgaacatcggcgcaac
tttgccgagctaagtcaccgcatactgcgggtgatcgtaaagcaggaaagcacacgcaag
ctgggtttggccctctcgccggaagaggaagcgattcggacgaagctcgaaaacatgcat
gcgctcgtatccaccccgacacagttccgtgggaggctgagcgaactcctttcccagatg
cggatgcagcgcaaccagtgggcgcacgggaacttcctgaacgagtacacgctggacaag
gatgcaacgcaggagatgcaatcgttccttacgatgcagcagaaggcggtttcgtttttg
atcgacacgatacacaaggacatgaagacgcttaaagttatcaccgaaggtatgacgcag
ctagtacagggctag
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