Anopheles funestus (African malaria mosquito): 125771674
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Entry
125771674 CDS
T09273
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
afun
Anopheles funestus (African malaria mosquito)
Brite
KEGG Orthology (KO) [BR:
afun00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afun04147
]
125771674
00535 Proteoglycans [BR:
afun00535
]
125771674
00536 Glycosaminoglycan binding proteins [BR:
afun00536
]
125771674
Exosome [BR:
afun04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125771674
Proteoglycans [BR:
afun00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
125771674
Glycosaminoglycan binding proteins [BR:
afun00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125771674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Motif
Other DBs
NCBI-GeneID:
125771674
NCBI-ProteinID:
XP_049298506
LinkDB
All DBs
Position
3:35005894..35221539
Genome browser
AA seq
1164 aa
AA seq
DB search
MKWLYGTVVTLICIAHRVTSSELNIFGGQGIRDALAERDLMGAIQIPLQNGVKFVDGLDG
FPAFGVTSEADLKSPFKLILSDHLQDFAIIATVRPQSSSGGWVFSVVNSLDTVVQLGLLL
EPTATGDQWNATLYYTDAKKERNSQPLASFQVPYGKSWMKMIFKVLPDQVVFYYNCLEAG
IVPVKKEPRKLVFDSASTVYIGQAGPILKQKFEGTFLFLKIYGYPEIVKTHCNRTSLPVD
EELESADEFGDDFNSEMVYDQSGDDDGFNEPPMISPPPPEYGYRVKGDKGERGAKGESIR
GPPGPPGPQGPPGPPGPPGAVGPKGGGYFDGDGSGDEMKRLSQLYDTLPNRKHGGQCFCN
ASLIIEELKMDSKLREYLRGPQGMPGKEGKTGSPGLTGVTGPQGERGTSGPKGDKGDRGD
QGATGPEGLHGSKGEPGLDGAPGVPGPAGPPGPPGLPENYDTNWNPSRMFKESMLGAPIQ
GMRGGSPGLKGEPGEKGEIGFPGEKGEHGTKGDRGDPGLTGAKGERGHQGAHGQPGPKGP
PGTPGIPGLPGQTGASGLKGEKGNTGESGPPGPPGPPGMVLHSEGGRNGTQDQCQCQPGP
PGPAGLRGPPGYDGAPGLTGETGLPGHPGLPGDKGERGLPGTKGEKGPEFIINENAAFNS
SRANKGEKGERGQRGRRGKTGAPGPIGPPGKSGGMAETWPGRPGPKGDQGPKGEKGDSMT
LRGVSIPKGDKGDRGMNGRDGLPGPPGLPAASGDGGVQYIPMPGPPGPPGQPGPPGPPGL
SIIGEKGEPGMDSRSPFYSDSQHGYYGRPGGRSSLDELKALRELKHHKDYEDSTLGPPGP
PGPPGPAGRPLHDSDEIPNSYGANVRIVPGAVTFQNAETMSKMSSTTPVGTLAYIIDEEA
LLVRVNKGWQYIALGTLVPIATVPPPTTTIVPPQRSDLQASNLIHNLPQPGDGSVFTATP
EYESLRMAALNEPYPGDMQGIRGADFACYRQARRAGLLGTFRAFLSSRIQNLDSIVRIAD
RELPVVNTRGDVLFNSWNGIFNGQGGFFSQAPRIYSFSGKNVLTDMAWPQKLVWHGSSAH
GERAIDTYCDAWHSASPDKVGLASSLLGNKLLDQERYSCDNRFVVLCVEAVPQDRRRKRR
DTRSQHEFANEKEYSQYLQSISAL
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggctttacggaacggtcgtgacgttgatttgcatcgcacacagagtgacctca
tcggagctgaacatatttggcggccagggcatcagagatgcactcgccgaacgcgatctg
atgggagcgatccagataccgctgcagaacggtgtcaagttcgtcgatggactggacggg
tttccggcgtttggcgttaccagcgaagctgacctgaagtcaccgttcaagctcatcctt
tcggatcacctgcaggattttgccatcatcgcaaccgtcagaccgcagtccagctccggt
ggttgggtgttctctgtcgtcaactcgctcgacaccgttgtccagttgggtttgctgctc
gaaccgaccgctaccggtgaccaatggaacgcgacgctatactacaccgatgcgaaaaag
gaacgcaacagccaaccgctagcatcgttccaggtgccgtacggaaagagttggatgaag
atgatttttaaagtgctaccggatcaggtggtgttctattacaactgtttggaggcgggc
atcgtgccggtgaagaaggaaccacgtaagttagtgtttgatagcgcctcgacggtgtac
attggccaagccgggcctatactgaagcagaaatttgagggaacgtttctgttcctgaag
atctacggctatccggaaatcgtgaaaacgcactgtaaccgaacgtcgctaccagttgac
gaagagctcgagtcggcagatgagttcggggatgactttaattccgagatggtgtatgac
caaagtggtgacgacgatggattcaatgagccaccgatgatttcaccaccaccgcccgag
tacggctaccgggtgaagggtgacaagggcgaacggggcgctaagggggaaagcattcgg
gggccaccgggaccaccgggtccccagggaccaccgggtccaccgggaccaccgggtgca
gtaggaccgaagggtggcggatacttcgatggtgatgggtctggtgatgagatgaaacga
ctgtcacagctgtacgacacactgccaaaccgaaaacatggcgggcaatgcttttgcaat
gcatcccttatcatcgaggaactcaaaatggacagcaaactgcgcgagtatcttcgcggc
cctcagggcatgcccggcaaagagggaaagaccggttctccgggtctaacgggcgtcact
ggtccacaaggtgaacgcggtacttccggcccgaagggtgacaagggagatcgcggtgac
cagggcgctaccggaccggagggcctccacggaagcaagggggaaccgggtctggatggg
gcacccggtgtaccgggcccagccggaccgccaggtcctccagggcttccagagaactat
gatactaattggaatccatcgcggatgtttaaggaatctatgctcggtgcaccgatccaa
ggaatgcgcggcggttcaccgggactgaagggtgaaccgggtgagaagggcgagatcgga
ttcccgggtgaaaagggcgaacacggtaccaaaggtgaccgcggtgatccgggtctgaca
ggtgccaaaggtgaaaggggccaccaaggagcgcacggacagccgggaccgaaaggaccg
ccgggcacacccggcataccaggacttcccggccaaacgggtgcatccgggctgaagggt
gagaagggcaatacgggcgaatcgggcccacccggtccacccggtccacccggtatggta
ctccattccgagggtggccgaaacggtacgcaggatcagtgtcagtgtcaaccgggacca
cccggaccggcaggattgcgcggtccacccggatacgatggtgcgcccggacttacgggt
gaaaccggacttccgggacatcctggtttgcctggtgacaaaggcgaacgtggacttcct
ggtacgaagggtgagaaaggaccggagttcatcatcaacgaaaacgcggcatttaactcc
tccagggctaacaaaggtgagaaaggtgaacgtggccaacgaggacgccgggggaagacg
ggcgcaccgggaccgattggaccaccgggaaaatctggcggcatggcagaaacgtggccc
ggccgaccaggacctaaaggcgatcaagggccgaaaggagagaaaggagacagcatgacc
ttgcgaggagtaagtataccaaagggtgataaaggcgaccgtggcatgaatgggcgggat
ggactgccaggaccgccgggacttccagctgcatccggtgacggaggcgtccaatatatc
ccgatgccgggaccaccgggaccaccgggacaaccgggaccacccggtccacccgggctg
tccatcattggtgagaagggtgaaccgggcatggattcgcgcagtcccttctacagtgat
tcccagcatggatactacgggcgaccgggaggtcggtccagtttggacgagctgaaggca
ctacgagagctcaaacatcacaaggactacgaagacagcacgctcggaccgcccggacca
ccaggacccccaggaccggccggacggccactgcacgatagtgacgagataccgaacagt
tacggggccaacgttcgcatcgtgcccggagccgtcactttccagaatgcagaaacgatg
tcgaagatgtcttccacgactcccgtcggtacgctcgcttacataattgacgaggaagca
cttctggtacgagtgaacaagggctggcagtacattgcactaggaacgcttgtgccaatt
gcaacggtaccaccgcccaccaccaccatcgtaccaccgcagcgttccgatctgcaagcg
tcgaatctcatccacaatctcccacagccgggcgacggctcagtgttcactgccacaccg
gagtatgagtcgttgcggatggcagcacttaacgaaccgtacccgggcgacatgcagggc
atccgtggtgcagacttcgcctgctatcgacaagcccgccgagccggtctcctgggaacg
tttagggctttcctttcgtcgagaatacaaaatctagactcgatcgtacggatagcggat
cgtgaactaccggtcgtgaatacccgcggtgacgtcctgttcaattcgtggaatggtatc
ttcaatggacagggtggattcttctcgcaagcaccacggatatacagcttcagtgggaag
aatgtgctcaccgatatggcgtggccccagaaactggtgtggcacggttctagtgcgcac
ggtgagcgtgcgatagacacgtactgcgatgcctggcactcggcatcgccggataaggtc
ggtctggccagcagtttactcggtaacaaactgctagaccaggaacggtactcctgtgat
aatcggttcgtggtactttgcgtcgaagcggtcccgcaggaccgaagacgaaagcgaaga
gataccagaagccaacacgagtttgccaacgagaaggagtacagccaatatttgcaaagc
atcagcgcactgtaa
DBGET
integrated database retrieval system
