Anopheles funestus (African malaria mosquito): 125771778
Help
Entry
125771778 CDS
T09273
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
afun
Anopheles funestus (African malaria mosquito)
Pathway
afun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125771778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afun03019
]
125771778
03041 Spliceosome [BR:
afun03041
]
125771778
Messenger RNA biogenesis [BR:
afun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125771778
Spliceosome [BR:
afun03041
]
Complex B
Other components
Prp19-related factors
125771778
Complex C
125771778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
TPR_14
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_12
TPR_2
TPR_8
TPR_10
Mad3_BUB1_I
ARM_TT21_C
PPR
ARM_TT21
NRDE-2
SNAP
Motif
Other DBs
NCBI-GeneID:
125771778
NCBI-ProteinID:
XP_049298767
LinkDB
All DBs
Position
3:82558913..82561783
Genome browser
AA seq
867 aa
AA seq
DB search
MPIASEVNLAEVFFNEDDLPYEEEILRNAYSVKHWMRYVEHKRNAPRFVINTVFERALKE
LPGSYKLWYNYLKTLRKQVKGKCITDSEYEEVNNAFERALVFMHKMPRIWMDYCSFMTFQ
CKITRARQVFDRALRALPITQHHRIWPLYLDFLKRFDIPETAVRVWRRYLKLCPEDAEEY
VEFLQSIGHLDEAAQQLASIVDNENFVSKHGKSNHQLWNELCELISKNPDKVHSLNVDGI
IRGGLRRYTDQLGHLWNSLAGYYVRSGLFDRARDIYEEAIQTVTTVRDFSQVFDAYAQFE
ELSLSKVMEILERNPNPTEDHEIDVELRMARFEYLMERRLLLLNSVLLRQNPHNVAEWHK
RVELYEGKPHEIINTYTEAVHTVQPKQAVGKLYTLWVAFAKFYETNKQLADARIVFEKAV
QVDYLKVDELASVWCEWAEMEIRQEQYEEALRIMQRATAMPKRKVAYHDDTETVQMRVYK
SLKLWSMYADLEESFGTFKTCKQVYDRIIDLKICTPQIIINYGMFLEEHNYFEEAFKAYE
KGIALFKWPNVYDIWNTYLTKFLNRYGGQKLERARDLFEQCLDGCPPELAKNLYLLYAKL
EEQHGLARHAMAVYERATTAVKEEEMYAMFNLYIKKAAEIYGIPRTRQIYEKAIEVLPEA
DSRQMCVLFAEMETKLGEIDRARAIYAHCSQMCDPRVTADFWQTWKEFEIRHGNEDTMRE
MLRIKRSIQATYNTQINMMSAALINAAVTTGEPPKDAMRALEVKAAETTARAIAAVGATG
GNIMFVRGETQGGASKDDRVVNPDEIDIDDEEEEDEEDEEENATEGDGGGSVDVSKKIPI
ERQSIPAKVFGSLRREVEEKEENEMDE
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcgcatcggaagtgaacctggccgaagtattcttcaacgaagatgacctaccg
tatgaagaggagatccttcgtaatgcctactccgttaagcactggatgcgctatgtggag
cacaaacgaaacgcgcctcgattcgttatcaacacggtgtttgagcgagcgctgaaggaa
cttcccggttcctacaagctgtggtacaactacctcaaaacgctccgaaagcaagtgaag
ggcaaatgcattacggacagcgagtacgaggaggtgaacaacgcgttcgagcgtgcgctc
gtgttcatgcataagatgccccgcatctggatggactactgctcgttcatgacgttccag
tgcaagataacgcgcgcgcggcaagtattcgatcgcgccttacgagcacttcccatcacc
cagcatcatcgcatttggccgctgtatttggattttttgaagcgctttgatatccccgaa
acggcggttcgtgtatggcgccgttacttgaagctgtgtcccgaagacgctgaagaatac
gtcgagtttctgcaatcaattggccatctggatgaggcagcgcagcagcttgccagcata
gttgataacgagaacttcgtgtccaagcacggcaaatcgaaccatcagctgtggaacgag
ctttgtgaattaatttccaaaaatcccgacaaagtgcactcgctcaacgtggatggcatc
atccggggtggactgcgacgctacaccgatcagttaggccatttgtggaattcgctcgcc
ggttactatgtacgcagtgggctgtttgatcgggcacgagacatctatgaggaagccatc
caaacggtaacgaccgtgcgcgacttcagtcaggtattcgatgcgtacgcacagttcgaa
gagttaagtcttagcaaggtgatggagatcctggagcgcaacccaaacccaaccgaagac
catgaaatcgatgtggaactccgaatggcccggttcgagtatctcatggaacgtcgattg
ctgctgctgaacagtgtgcttttgcgccagaatccgcacaacgttgccgagtggcacaag
cgggtggagctgtacgaaggaaagcctcacgaaatcatcaacacgtacacggaagcagtg
catacagtgcaaccgaagcaggccgtcggaaaactctacacactatgggtggctttcgca
aagttttacgagacgaacaaacagctggccgatgcgagaatcgtgttcgagaaagcagtc
caagtcgactatttaaaggtggatgaactggccagtgtttggtgcgaatgggccgagatg
gagatccgccaggagcagtacgaagaggcgctacgcatcatgcaacgtgcgacggcaatg
ccgaagagaaaagtggcctaccacgatgacacggagacggtgcagatgcgcgtgtacaag
tcactcaaactgtggtctatgtatgcggacctggaggaaagcttcggtacgttcaagacg
tgcaagcaggtgtacgatcgcatcatcgatctgaagatctgcacgccacaaatcatcatc
aattacggcatgtttctggaggaacacaactacttcgaggaagcgttcaaggcgtacgag
aagggtatcgcgctgttcaagtggcccaatgtgtacgacatctggaacacgtacctgacc
aagttcctgaaccgttacggaggtcagaagctggagcgagcacgtgatctgttcgaacag
tgtttagacggctgtccaccggagctggccaagaatctgtatctgttgtacgcaaagcta
gaggagcagcacggtctggcacggcatgcaatggccgtttacgagcgagccacaaccgct
gtcaaggaagaggaaatgtacgcaatgttcaatctgtacattaaaaaggcggccgaaatc
tatggcattccgcgcacgcgccagatatacgagaaagcgatcgaggtattgccggaagcg
gactcgcgccagatgtgcgtcctgttcgccgagatggaaacgaagctgggtgagatcgat
cgtgcacgggccatctacgcccactgcagccaaatgtgcgatcctcgcgtaaccgctgac
ttctggcagacgtggaaggagttcgaaatccgtcacggcaatgaggacacgatgagagaa
atgttgcgcattaagcgatcgattcaagcgacatacaacacccaaatcaacatgatgtcg
gcggcactgatcaacgcagccgttacgaccggcgaacccccgaaggatgcgatgcgtgca
ctggaggtaaaggcggccgaaacaacggcccgggcaatagcggccgttggtgcgacgggc
ggaaacattatgtttgtgcgtggtgaaacacaaggaggagcgtcaaaggacgatcgtgtg
gttaatcccgatgaaatagacatcgacgacgaggaggaggaagatgaggaagacgaagaa
gaaaatgccacggaaggtgatggtggtggtagtgtggatgtcagcaaaaagatacccatt
gaacgccaaagcattccggcgaaagtattcggcagccttcgtcgagaagtggaagagaaa
gaagagaatgaaatggacgaataa
DBGET
integrated database retrieval system
