Anopheles funestus (African malaria mosquito): 125771869
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Entry
125771869 CDS
T09273
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
afun
Anopheles funestus (African malaria mosquito)
Pathway
afun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125771869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afun03019
]
125771869
Messenger RNA biogenesis [BR:
afun03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
125771869
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Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_CSD1
PIN_4
CSD2
Rrp44_S1
OB_HELZ2
Motif
Other DBs
NCBI-GeneID:
125771869
NCBI-ProteinID:
XP_049298946
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All DBs
Position
3RL:42706119..42709327
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AA seq
961 aa
AA seq
DB search
MLTNKVFMKKTKRGNILKIVREHYLRDDIWCGSAVCHKCPLEENAVLLEDVPKSVSDRFT
FPHYLLLDTNIILYQMDLLEESAIQNVIILNTVLDEVKHRSAVIYKRLRAILSNPERKFY
TFVNEHHKDTYVERMPGESANDRNDRMIRTATEWYEKHLRQEKGKNAHIRIVLLSDDADN
RAKAADLGLSTCSAAEYMEAAKENYAHLLDKIAQREVVCASKDPLFPSHLTVMQVHEGIK
NGKLMQGGFLASRENYLEGYVRVEGIEKAVLIQGRMNLNRAVDGDVVAIEMLPESEWKAP
SDVVLVDEQNDPGDMVEPDPTFSVKPQAEREPTAKIVGIIKRKWRQYCGILIPSHIQGST
RHIFVPAERKIPRIRIETRQAATLLSQRIIVAIDQWPRHSRYPQGHFVRALGPIGSKETE
NEVILLEHDVPHNRFSEDVLACLPQMPWVIRDEDLKRRVDLRGITICSVDPPGCTDIDDA
LHARRLPNGNIEVGVHIADVSHFIRPGTALDREAAGRATTVYLVDKRIDMVPELLSSNLC
SLRGGEERFAFSCIWELDDEANIKHTKYHKSVIKSKNALTYEEAQIIIDDAKQTNEVATS
LRMLNSLAKILKKRRTEKGALVLASPEIRFHVDSETHDPIDVKAKQLLETNSMVEEFMLL
ANVSVAEKIEKEFPECAMLRRHPCPPQSNYEPLVKAAQHQGFEIVTTSGKELATSLDNAV
KRDNPYFNTMLRILATRCMMQAVYFISGTLQQDEFFHYGLAAPIYTHFTSPIRRYADIIV
HRLLAACIGADSTYPELLDKKINSNLCNNLNYRNRMAQYAGRASVALHTHLFFRKRSEDE
QAYILFIRKNALQILVPKYGFEGTIYVTGRNNEEIKTGVRFVYDEERQTQRCGNVVFRAF
DPVVVRLSLDSTNVQHEKLVFELVEPYIEGFSIKPDGMEDEAPKRKSDQTPTKSKKSKKA
K
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgttgacaaacaaagtgtttatgaaaaaaaccaagcgcggtaacattctgaaaattgtc
cgcgagcactacctgcgggatgatatctggtgcggttctgcagtctgccataagtgccct
ttggaagagaatgcagtactgctcgaggacgttccgaaatccgtaagcgaccggtttacc
tttccgcactatctgctgctggatacgaatattatactctaccagatggatctgctagag
gagagtgcaatccagaacgtgatcattctcaacacggtgctggatgaggtgaagcatcgg
agcgcagtaatttataagcgtttgcgggcgatactgtctaatccagagcgaaagttctac
accttcgtcaacgaacatcacaaggatacgtacgtggagcgtatgcccggtgaatcggca
aacgatcgaaatgatcgtatgatacgaacggcgacggaatggtacgagaaacatctacgt
caggaaaagggaaaaaatgcacatattcgtatcgtactgctatcggacgatgcagataat
agggccaaagcggccgacctcggtctgagcacgtgttccgctgccgaatacatggaagct
gctaaggagaattacgctcatctgcttgacaagattgctcagcgtgaggtagtttgcgca
tcgaaagatccactctttccatcgcatctgaccgttatgcaggtgcacgaaggcatcaag
aatggaaagttgatgcagggtggttttttggcatcgcgagaaaattacctcgaagggtat
gtgcgggttgaaggcattgagaaagcggtactcattcagggacgtatgaatctgaaccgt
gccgtcgatggggatgtagtggccatcgaaatgctgcccgagagtgaatggaaagccccg
agcgatgtggtgctagtggatgaacagaacgatccgggtgatatggtagaaccggatccg
acattcagcgtgaaaccacaggcagagcgtgaaccaacagcaaagatagttggcattatt
aaacggaaatggcgccagtactgtggaatactgatacccagtcatatccagggctcaaca
cgccacatttttgtaccggcggaacggaaaattccacgtattcgcatcgaaacgcgtcag
gcagcgacgctcttatcccagcgtatcatagttgcgatagaccagtggccacgacattcg
cgctatccacagggtcatttcgtgcgtgctctcggaccgatcggttcgaaggaaacggaa
aatgaagttattttgctggagcatgacgtgccgcacaatcgtttctcggaggatgtactc
gcctgcttgccgcagatgccatgggtaatcagagatgaagatttaaagcgccgtgtagat
ttgcgtggcattaccatctgctcagtggatccgcccggatgtacggatattgatgatgcg
ctgcacgcacgccgcctacctaatgggaacattgaagtgggagttcacattgcggacgtt
agtcacttcattcgaccgggcacagcgctcgaccgggaagctgcgggtcgagccacaacc
gtttatttggtcgataagcgtatcgatatggtgccggagttgctcagttccaacctttgc
tcgctgcgcggtggtgaggaacgattcgcattttcctgtatctgggagctggacgatgag
gcaaacataaagcacacaaagtaccacaaaagtgtgatcaagtcgaaaaatgcactcacg
tacgaagaggcacaaatcatcatcgatgatgcgaagcaaaccaatgaggtggccacttca
ttgcgaatgctgaacagcctcgctaaaatcttgaaaaaacggcgcacggagaaaggggcc
ctggtattggcttcgccggaaattcgtttccacgtagatagcgagacgcatgatccaatc
gacgtgaaggctaagcaactgctggaaacgaactcgatggtggaggaattcatgctgctc
gcgaacgtttcggtagcggagaagatcgaaaaagagtttcccgagtgtgcgatgttacgt
cgccatccgtgtcctccccaatcgaactacgagccactggttaaggctgcacagcatcag
ggctttgagattgtaacgacaagcggtaaggaactggcaaccagcttagacaatgcagta
aagcgcgacaatccatacttcaacaccatgctgcgcatactggccacgcgttgcatgatg
caagccgtctacttcatcagtggcactttgcagcaggatgaatttttccactatggtctg
gcggctccaatctacacccactttacgtctccgattcgtcgttatgctgacatcattgtg
caccgtctgctagcggcttgcatcggtgctgattctacctacccagagctgctggacaaa
aagattaactctaacctgtgcaacaatctaaactaccgcaaccgaatggcgcagtacgcc
ggtagagcgtctgttgctctacacactcatctgttcttccgcaagcgatcggaggatgag
caagcgtacatcttattcattcggaagaacgccctccagatactggtgccaaagtatgga
ttcgagggtacgatttacgtgacggggcgaaataacgaagaaatcaagacgggcgtacgg
ttcgtgtacgacgaagaacgacagacgcagcgttgtggaaatgtcgtattccgggcgttc
gatcccgtcgtagtacggttaagcttggattcgacaaatgtgcagcacgagaagcttgtg
tttgaactggtggaaccatacattgaagggttcagcataaaaccagacggcatggaagat
gaagcaccgaaaaggaaaagcgatcagactcctacgaaatcgaagaagagtaaaaaagct
aagtaa
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