Anopheles funestus (African malaria mosquito): 125774950
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Entry
125774950 CDS
T09273
Name
(RefSeq) protein PAT1 homolog 1-like
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
afun
Anopheles funestus (African malaria mosquito)
Pathway
afun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125774950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afun03019
]
125774950
Messenger RNA biogenesis [BR:
afun03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125774950
mRNA degradation factors
5'-3' decay
Decapping complex
125774950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIA
PAT1
Motif
Other DBs
NCBI-GeneID:
125774950
NCBI-ProteinID:
XP_049301281
LinkDB
All DBs
Position
2:71176849..71179713
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AA seq
836 aa
AA seq
DB search
MDSFFGFNTTLPVENDDGDDEFGRICPQAGTVGLRSPLQRRCKEDMSDEEEYDALNDETF
GSADNGDWEDIHENLLRLYDTNDESGRSSVVAQSIGDEFASKLRLDPSIWGSPMKVQPSV
QQQYSDHPSNVQQPVQSFRQSTTTQPVKPREHFTPTKDFKPIPSMPLINPSVPPPLGVTP
ALMTVPPPHLLAARNCALFPPGPPPPPGAPLMNHPNRLPIGILPLNMLAARPYSTPINNL
AMHPAFPPRCPYGSPLQGFLGPPVTIGPPLTQRHPGPPGPFLMHRSPTPLQNNQFNQRLV
QEIQQNHPMLAFNRQVANSFNACNNGVMKTVPQNQPRPVFVKQMYYQQQQQQQRSRLCNG
IPDGGTPPKPHDEYANMMSTRDKQWLIGIQLTQLNSDLPYLNDYYFTVYKQRLAAAKGES
ENRIYKENQLSHPFTQPKEHAQLLLLSMLTKNVKGGLLNLNRERRSSESKPASGTDGKEG
GRAYTPFQFEKSLGKLQCGSVTAPRKLIDADVMGNDQLNGNGVSAAEQSQTQRKARHVLL
LVETLYRLVLQLEDKVNPAAIAAASLLREKELRERDMLCGAAGTDDRSHGVQLGALSGTA
AKCNGMLAEFEESFEDLSASLIGQLSQDKITSILGVRKGRILLRRSLAVLHDHPSRWMLW
GMIFTALPCLGKRDRDDAEGLLLALFSEFERQLRYGTMKDLLSVAKTIGSSRKVMQCIVS
SKFLLSCIITIIFQMEMFCGKNPATLLTASEDDWWVSFLEDVNEVVKAKVGSTPSSSSIA
INPDNNIVRTLRVHFARFGTRVDGTDLMNFITDNGNHQQRSVAARKQSLQETNITK
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggattcattttttggatttaataccactctaccggtggagaacgatgacggcgatgat
gagtttggcagaatatgtcctcaggcaggcacagtcggattgcgttcaccgctgcaacgg
cgatgtaaagaagacatgtcggacgaggaagaatatgacgccctgaatgatgaaacgttc
ggttcagcggacaacggtgattgggaagacattcacgaaaaccttttgcggctctacgat
accaacgatgagagcggtcgcagcagtgtcgttgcgcagagtattggggatgagtttgca
agcaagttacggctagatccgagcatatggggaagtccaatgaaggtgcaaccttcagtt
caacagcagtactctgatcatccatcgaacgtccagcaaccggtgcaatcgtttcgccaa
tcaacaactacgcaaccggtgaagcctcgggaacattttacaccgactaaggattttaag
ccgattccatccatgccactgatcaatccatcggtacctccaccactgggagttacaccc
gcgctgatgaccgtacctccaccgcatctattggcagcgagaaactgtgccctgtttcct
ccgggaccgccaccaccaccaggagcccctctgatgaaccatccgaatcgtcttccgatt
ggcatattgccgttgaacatgttagctgcccgaccgtattcgacgccaatcaacaatcta
gcaatgcatcctgcttttccaccgcgctgtccatacggttcgccgctgcaaggttttttg
ggtccaccagtgacgattggtcccccgctaactcaacgccatccggggcctcctgggcca
tttctgatgcaccgtagcccaactcccctgcagaacaatcagttcaaccagcggctagtg
caggaaatacaacagaatcatccaatgctagcgtttaacagacaggttgccaactccttc
aacgcttgcaataatggagtaatgaaaactgtgcctcaaaaccaaccgaggccagtgttc
gtgaagcaaatgtattatcagcaacagcagcaacagcaacgttcgcggctatgcaatggt
attccggacggtggtactccaccgaaaccgcacgatgaatacgcaaacatgatgagcaca
agggataagcagtggttaatcgggatacagctaacgcaactcaactccgatttaccatat
ttgaacgattactactttaccgtgtacaagcaaaggctggcagcggcgaagggcgagagt
gaaaatcgtatctataaggaaaaccaactgagccatccatttacccagccgaaggagcat
gcccagctgctcctgctttcaatgctaacgaagaatgtaaagggtggcctcttgaactta
aaccgcgagcgccgaagttccgaatccaagccggcgagcggtaccgatggcaaagagggc
ggtcgtgcgtatacaccgtttcagtttgaaaagtcgctcggaaagctgcagtgtggaagt
gtaacggcgccgaggaagcttatcgatgccgatgttatgggaaatgatcaactgaacgga
aatggcgtatcggcggcggaacagtctcagacacagcgcaaggctcgccatgtgctgctg
ctagttgaaacattgtacaggcttgtgctccagctggaggataaggttaatccggctgct
atagccgctgccagtttgttgcgggaaaaggaattacgcgaacgtgacatgctgtgcggt
gctgcaggtactgacgaccgttcccatggtgttcagttaggtgcgttgagcggaactgct
gcgaagtgtaacgggatgctagccgagttcgaagaatcattcgaggacctgtcggcttcc
ctgatagggcagctttcgcaagacaaaattacatccatactcggtgtacgtaagggcaga
atacttcttcggcgttcgttggcagttcttcatgatcatccgtctcgctggatgctgtgg
ggcatgatctttacagcattaccttgcctgggcaagagagatcgagatgatgccgagggt
ctgctgttggcactgttcagcgagtttgagcgtcagcttcggtacggaacgatgaaagat
ttgctgtcggtggcgaagacgatcggcagctcgcgcaaagttatgcaatgcattgtcagc
agtaagtttctgctgtcctgcatcataaccataatttttcaaatggaaatgttttgcggc
aaaaatccggctacgcttttaaccgcttccgaggatgactggtgggtatcgttcctggag
gacgtgaacgaggttgtaaaggctaaggttggatcaacgcccagcagcagcagcattgcg
ataaatccggataacaatatcgttcgcacgctacgggttcattttgcacgtttcggcaca
cgtgttgacgggacggatctaatgaacttcatcactgataatggtaaccaccaacagcga
tcggttgctgccaggaaacaatcattacaagaaacaaacattaccaaatga
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