Aequoribacter fuscus: EYZ66_02470
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Entry
EYZ66_02470 CDS
T07243
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
afus
Aequoribacter fuscus
Brite
KEGG Orthology (KO) [BR:
afus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afus03009
]
EYZ66_02470 (dbpA)
Enzymes [BR:
afus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EYZ66_02470 (dbpA)
Ribosome biogenesis [BR:
afus03009
]
Prokaryotic type
rRNA helicases
EYZ66_02470 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
Helicase_C_2
P-loop_SecA
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QHJ87230
LinkDB
All DBs
Position
complement(539371..540759)
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AA seq
462 aa
AA seq
DB search
MSPSAFSKLNISPAQLKSLEALGYKAMTPVQEQSIPLILKGRDLVVRAKTGSGKTATFGI
GLLNKINPRFFGAQALVLCPTRELADQVGAEIRRLASQMPNIKVVMLCGGKPFGAQRDSL
QHGAHVVVGTPGRIHDHLTKGTLQIDQVSTLVLDEADRMLDMGFADTMQAIIAEVPKNRQ
TLLFSATYPDNIQKISRSIQANPAMVQVDDDVAHEEGVIEQLFFEIKKHERYPTLLALFE
HYRPKNAAVFCNTKKQCAEVADFLNEHDIEAKALHGDMDQRERDQVLLQFANGSCPVLVA
TDVAARGLDIKSLAMVVNYELPRDPEIYVHRIGRTGRAGETGLAFSLVTESETPRLRQIE
QYQDQPCACDVLASLDRDPNYELKGEWVTIQFDSGRKQKMRPGDILGALTGDAGLPGSAI
GKITIADYSSYVAVSRDVLRQAMNYVSQGKIKGRNVRARRLR
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtctccctctgccttttccaaactcaacatctcacccgcacagctgaagtcgttggaa
gcgctgggctacaaagccatgacgcccgttcaagaacaaagcattcccttgattctcaag
ggccgcgatttagttgtgcgcgccaaaaccggcagcggcaaaacggcaacctttggcatc
ggtttactgaataaaataaacccacggttttttggggctcaggcacttgttttgtgcccc
acccgagagcttgccgaccaagtgggagccgagatacgccgtctcgccagccaaatgccc
aacatcaaagtcgtaatgctgtgcggcggcaaaccttttggtgcccagcgagattcgcta
cagcacggtgctcacgttgtcgttggcacccccggccgcattcacgaccacctgactaaa
ggtaccttacaaatcgatcaagtaagtacattggtcttagacgaagccgaccgcatgctc
gatatgggctttgccgataccatgcaggcgattattgccgaggttcccaaaaataggcag
accctgctgttttcggcaacctaccctgacaacattcagaaaattagtcgctcgattcaa
gcaaacccggccatggtgcaggtcgacgacgatgtcgcccacgaagaaggggttattgag
caactcttcttcgaaattaaaaagcacgagcgctaccccaccttactcgcgctgttcgag
cactaccgcccaaaaaacgccgcagtattttgcaacaccaaaaagcagtgcgccgaagtc
gccgactttttaaacgagcacgacatcgaggccaaggcattgcacggtgacatggaccaa
cgtgaacgcgaccaagtgctcctgcaattcgccaacggtagttgtccagtgttggttgcc
accgatgtcgctgctcgtggtttagacattaaatcgctcgctatggtcgtgaactacgag
ctacccagagaccccgaaatttacgtgcaccgcatcggtcgaaccggccgcgcgggcgaa
accggactggcgtttagtttggtgaccgagtccgaaacacctcggcttagacaaatcgaa
caataccaagaccagccctgcgcctgcgatgtactcgcatctctagaccgcgacccaaac
tatgaactgaaaggggagtgggtcaccatacagtttgattctggccgtaagcagaagatg
cgtcctggggacatcctaggcgccttaacaggcgacgccggcctacccgggtctgccatc
ggtaaaattacgatcgccgactacagcagctatgtggccgttagtcgcgatgttttgcgc
caggcgatgaactacgtgtcgcagggtaagatcaaaggtcgtaacgtgcgggccagacgc
cttcgttga
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