Aequoribacter fuscus: EYZ66_06020
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Entry
EYZ66_06020 CDS
T07243
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
afus
Aequoribacter fuscus
Brite
KEGG Orthology (KO) [BR:
afus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afus03032
]
EYZ66_06020 (topA)
03400 DNA repair and recombination proteins [BR:
afus03400
]
EYZ66_06020 (topA)
Enzymes [BR:
afus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EYZ66_06020 (topA)
DNA replication proteins [BR:
afus03032
]
Prokaryotic type
DNA Topoisomerases
EYZ66_06020 (topA)
DNA repair and recombination proteins [BR:
afus03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EYZ66_06020 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
DUF2399
Motif
Other DBs
NCBI-ProteinID:
QHJ87882
LinkDB
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Position
1345410..1348049
Genome browser
AA seq
879 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDFIVKSSVGHIRDLPTSGSAASSTNPKERAAQAAKTR
KMSAEKKAQYQKKKAHDQLIRRMGVNPDKDWEAHYEILPGKEKVVNELKQLAAKADTIYL
ATDLDREGEAIAWHLQEAIGGDPERYRRVVFNEITKSAIQEAFEHPGSLDIARVNAQQAR
RFLDRVVGYMVSPLLWAKIARGLSAGRVQSVAVRLIVEREREIRAFVPEEFWEIHADLLS
SAEEQTRFEVRKYQGEGFRPRSESEAMAAVATLQTARYAVKARESKPTRSKAPAPFITST
LQQAASTRLGFSVKKTMTLAQRLYEAGHITYMRTDSTNLSAEAVNACRRYIETNFDAPYL
PAKPKSYSAREDAQEAHEAIRPSDVFVQQTQLSAMERDAQRLYDLIWRQFVACQMPAAEY
LSTTLTVEAAGFELNAKGRVVVFDGYTKVLPPAAKKGQEDVVLPDLKVNDSLSLAKLDPS
QHFTKPTPRYGEASLVRELEKRGIGRPSTYASIISTIQDRGYVKLENKRFYAEKMGDIVT
QRLQSSFDDLLDYGFTAAMEERLDDVAKGELDWRALLDQFYADFSDRLEQAGAPDPDGMQ
ANAPTMTDIPCEQCGRPMQIRTAATGVFLGCSGYALPPKERCKQTINLVPGDEAISADAD
DEAESRLLISKRRCQLCNAAMDSYLIDEKRKLHVCGNNPDCSGFEVEQGQFKIKGYDGPV
IECDKCGADMQLKTGRFGKYFGCSSDSCKNTRKLLRSGEVAPPKIDPVPMPELQCAKVDD
HYVLRDGAAGLFLAASQFPKNRETRAPLVSELKPHREEIAAKYHYLLDGPEHDDEGNQAQ
IRYSRKTKEQYLMTEVNGKATGWRAHFEGGRWVESLGKK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggcactggtcattgtcgagtcgccagcaaaagccaagacgattaacaagtat
ttgggcaatgattttattgttaaatccagtgttggccatattcgtgatctgccgacctct
ggcagcgctgcgtcatctaccaatccaaaagagcgagcggctcaggcggctaagactcgc
aagatgtcagccgaaaaaaaagctcagtaccaaaaaaagaaagcgcatgaccagctcatc
agacgaatgggtgtcaatcctgacaaagattgggaggcgcattacgaaattttgccgggt
aaggagaaagtggttaacgagctcaaacagctcgcagcaaaagctgacaccatttatttg
gcgacggacttggaccgtgagggggaggccatcgcttggcacttgcaagaggccattggt
ggggatcctgagcgttaccgccgcgtggtatttaacgagatcaccaaatcggccattcaa
gaagcgtttgaacacccgggatccttagatattgctcgcgtgaacgctcagcaagctcgc
cgatttttagaccgggttgtgggttacatggtctcgccgctgctatgggccaaaatagcg
cgtggcttgtcggcaggtcgagtgcagtctgtggcggtgcggttgattgttgagcgcgag
cgcgaaatcagagcgtttgtgccggaagaattttgggagattcacgccgatttgttgtca
tcagccgaagagcagacgcgctttgaggttcgcaaatatcaaggcgagggcttccgaccg
cgctctgaatcagaggcgatggctgctgttgcgacgctgcaaacagctcgttatgcagtt
aaagcgcgcgagagcaagccgactcgctccaaagcgccggcccctttcatcacgtcgaca
ttgcagcaagcggcgagtacgcgtttggggttttctgtgaagaagacaatgaccttggcg
cagcggttatacgaagccgggcacattacctacatgcgaaccgattcgaccaacctcagc
gcagaggcggtcaatgcctgtagacgttatattgaaacgaattttgacgcaccttatctg
cccgcaaagcctaaaagttacagcgcacgcgaggatgctcaagaagcgcacgaagctatc
cgaccctcggatgtctttgtccagcagacacagctcagtgcaatggagcgcgatgcacag
cgactctacgatttgatctggcgccaatttgtggcttgccagatgccggcggcggaatat
ctctcgacaaccttgacggtcgaagccgcgggctttgaattgaacgcaaaagggcgtgtg
gtggtttttgatggttacaccaaggtgctgccgccggctgccaagaaaggtcaagaagat
gtcgtgttacccgatttaaaagtcaacgattcgctcagtctggccaagctggatccttcg
cagcatttcaccaaaccaacgccgcgttacggcgaggccagtttagtgcgagaactggaa
aaacgcggcataggtcgcccctcgacctatgcctctattatctcgacgattcaggatcga
gggtacgttaagctcgagaacaagcggttctacgcagaaaagatgggcgatattgtcaca
caacgtctgcaaagcagctttgacgatttgctggactacgggttcaccgcggcaatggaa
gagcgtttggatgacgtggccaaaggcgagttagattggcgggcattgttagaccagttt
tacgcggactttagcgatcgtttggaacaagccggcgcgcctgaccccgacggcatgcag
gcgaatgcgcccaccatgactgacattccctgtgagcaatgcggccggcctatgcaaatt
cgcacggcggctaccggtgtgttcctggggtgctcggggtatgctctgccgcccaaagag
cggtgtaagcagaccattaatttggtgccaggcgacgaggccatcagtgccgatgccgac
gatgaagcagagtctcgcttactgatcagcaagcggcggtgccagttgtgcaatgccgca
atggacagctacttgatcgatgaaaaacggaaactccacgtttgcggtaacaaccctgat
tgctcgggcttcgaggtagagcagggtcagtttaagatcaaaggttacgacggtccggta
atcgaatgcgataaatgtggcgccgatatgcagctcaaaacagggcgttttggtaaatat
tttggctgcagcagtgacagctgcaagaacacgcgcaagctactgcgcagtggcgaagtg
gcgccgcctaagattgatccggtgccaatgcccgagctccaatgtgccaaagtagacgat
cactacgtgcttcgggacggcgctgccggcctgttcttagccgcttctcagttccctaaa
aaccgcgagacgcgggcgccactcgtgagtgagctaaagccccatcgcgaagaaatagcc
gctaaatatcattatttgctggacgggccggagcatgacgatgagggcaaccaagcgcaa
atacggtatagccgaaaaaccaaagagcagtacttgatgaccgaagtcaatggtaaggcg
acgggttggcgtgcccatttcgaagggggccgctgggtcgagagtttgggtaaaaaataa
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