Aequoribacter fuscus: EYZ66_07860
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Entry
EYZ66_07860 CDS
T07243
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
afus
Aequoribacter fuscus
Brite
KEGG Orthology (KO) [BR:
afus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afus03021
]
EYZ66_07860 (rapA)
Transcription machinery [BR:
afus03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
EYZ66_07860 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
Tudor_RapA
ResIII
DEAD
AAA_34
AAA_22
Flavi_DEAD
SPAC22G7_03
Motif
Other DBs
NCBI-ProteinID:
QHJ88220
LinkDB
All DBs
Position
1741218..1743956
Genome browser
AA seq
912 aa
AA seq
DB search
MYTVGQRYLSQLDPQLGLGIVVETQARRVTVAFPAVDEERTYATANAPLSRLLFRIGDKV
RLADNQVYAVIKVTETAGVAVYTVSTTEGHEIEVSEVALAAELELNQPQQRLLTGQIDSA
TLFETRYKAVQHLHQLDQTEVRGLLAPRTLLLPHQVYLAQQVGTRHAPRVMLADEVGLGK
TIEAGMIIHQQLHTHRAKRVLVLTPEPLMAQWLVELRRKFNLRFDLLNQERMDTDDNPFE
EAQWVISCLDLVAKQERLSEQMVSEVWDLVVIDEAHQLEHADPVLKQCVNLLCARARGLL
LLTATPEQLGQEAHFERLHLLDPQRFASFSDYQTSEAQYQRIDQAIQSIEAGTGADLPFP
VHGSSTDAQVRYLLDFYGTGRCLYRNTRASVAGLPARALHPHPLESAPNGTAADDLMQQL
YPERYETDDNWVQAHPKVTWLVQFLKANKAEKVLVICGNASVATALEDYLHMRAGIRSAA
FYEGLSLVERDRAAAYFQESEHGAQVLVCSEIGSEGRNFQFSQHLVLFDLPLSPDLLEQR
IGRLDRIGQKQTIHIHVPFVLKSAQERLFKWYAQGLEVFTEHCAGAQRLYDQYAEELRDY
CLEQNNSTDFIERVAAATSQLKASLDAGRNRLLERHSLDSTKATQYIEQIKAWDDSTTLR
EWLELASNALDLDIDPLDRDTWIFKANEHTHEALIPFFQDDAITGTFSREIAASREDWEF
LTWEHPLVTETLELFETDTLGSGALSRLRLPNLPEGTLLLEAVAVVRVLGQSRMDLKRFL
PRTPIRLLIDAQGRNLADALPPEKLHPRLENLPAKAAGNAIKQLREPLLELISKTEQHAQ
TLAQTFINKAQEAFTDHIDAEIERTTLLSLAQADEHRNNELATLKQERDTGYAALAQSQV
SIHALRLIATHH
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgtataccgttggacaacgatatctttcacaacttgatccacagctgggtttgggcatt
gtcgtcgaaacgcaggcccgcagagttactgtcgcgtttcccgcggtcgacgaagagcgg
acctatgccaccgccaatgccccgctgagccgactactctttaggatcggagacaaagtt
cgtcttgccgacaaccaagtctacgccgtgatcaaggtcacagaaaccgcgggcgtcgcg
gtctatacggtatccaccaccgaaggccatgagatcgaagtaagcgaagttgccttggca
gctgaacttgaactgaatcaaccacagcaacgtttattaaccgggcaaattgacagcgcg
acgctgtttgagacgcgctacaaagccgtgcaacatctgcaccagttagatcaaaccgag
gtacggggactgttagcgccacgaacattgttgttaccccaccaggtgtacttggctcaa
caagttggcactcgccatgcaccccgagtgatgctcgcggatgaagtgggtctgggtaaa
acgattgaagccggtatgatcattcatcaacagctgcacacccaccgcgccaagcgtgtt
ttagtgctaacaccagaaccactcatggcgcagtggctggtggaattgcgacgaaaattc
aaccttcggttcgaccttctgaatcaggagcgcatggataccgacgacaacccctttgaa
gaagctcaatgggtcatctcttgcttagacctggtcgcgaagcaagagcgtttatccgag
cagatggtgtcagaggtctgggacctagtagtgatcgatgaggcgcaccagcttgaacat
gcagacccggtgctcaagcagtgcgtaaacctgctttgtgcccgcgcccgcggtttactt
ttgctgacagcgacaccggagcagctcggccaagaagcacatttcgaacgcctgcatctt
ctggatccacagcggtttgcgagcttcagtgactatcaaacgagtgaggctcagtatcaa
cgcattgatcaagcgattcaatccattgaagctggtacaggtgcggatcttcccttcccg
gttcacggtagctcgacggacgcgcaggttcgatatctactggatttttatggcacgggg
cgttgtctctaccgaaatactcgtgcctcggtggcgggtctgcccgcgcgcgccttacat
ccccaccctctggaaagcgcaccaaatggcacagctgccgatgacctaatgcagcaactg
taccccgagcgctatgaaaccgacgataactgggtgcaagcacaccctaaagtaacgtgg
ctggtgcagtttcttaaggcaaacaaggccgaaaaagtcctggtcatttgcggtaatgcc
tcggtagccacagcgctagaggattatctgcatatgcgcgcgggaatccgatcagccgca
ttctatgagggtctgagtttggtcgagcgagatcgcgccgctgcctactttcaagagagc
gagcacggcgcacaagtgttagtctgctcagaaatcggtagcgaaggccgaaacttccaa
ttttcccagcacctggtgctgtttgatctacctctatcccccgacttactggagcagcgc
attgggcggttagaccgcatcggacaaaagcaaaccattcatatccatgttcctttcgtc
ctcaaaagtgcgcaagagcgcttatttaagtggtacgcacaaggactcgaggtctttacc
gaacattgcgccggcgcacaacgcctatacgaccaatacgctgaagagcttcgagattat
tgcctagagcaaaacaatagcacggactttatcgaacgggtcgctgcggcgacgtctcaa
cttaaagcatcgcttgatgccggtcgtaaccgcctattagaacgccactccctcgactcg
acaaaagccacgcagtacatcgagcaaatcaaagcgtgggatgattcgaccacgcttcgg
gagtggcttgaattagccagcaatgcgcttgacctagatatcgaccccctcgatcgagac
acatggatttttaaagctaacgagcatacgcatgaggcactcattcccttctttcaggac
gatgcaataacgggcacattcagtcgtgagatcgccgccagccgtgaagattgggagttt
ctgacctgggaacaccctttagtcacagagaccttagaattgttcgagaccgatacgctc
gggagcggagcactgtcccgcctccgcctacccaatctacccgaaggtacactgctgctg
gaagcagtcgctgtcgttcgagtgttggggcagtcgcgcatggatttgaaacgtttttta
cctcgcacacccatccgactgctcatcgacgctcaagggcgtaatttggctgacgcccta
ccgcctgagaagctgcatccgcggcttgaaaatttaccagccaaagccgctggcaacgcg
ataaagcagttacgagaaccgctgttggagctgattagcaaaacagagcagcacgctcaa
acactcgcgcagacctttatcaacaaggctcaggaagcgttcaccgaccatatcgacgcc
gaaattgagcgcaccacgctactcagtcttgcccaagcagatgagcaccgcaataacgaa
ctggcgaccctcaaacaggaacgcgatacgggctatgccgctttggcgcaatcacaggtt
agcatccacgctttgcgcctaatcgcaacccaccattga
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