Aequoribacter fuscus: EYZ66_12685
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Entry
EYZ66_12685 CDS
T07243
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
afus
Aequoribacter fuscus
Pathway
afus02020
Two-component system
afus02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
afus00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EYZ66_12685
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EYZ66_12685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afus03021
]
EYZ66_12685
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
afus02035
]
EYZ66_12685
Transcription machinery [BR:
afus03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EYZ66_12685
Bacterial motility proteins [BR:
afus02035
]
Flagellar system
Flagellar assembly proteins
Stator
EYZ66_12685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
UPF0122
HTH_10
GerE
HTH_28
HTH_Mga
MarR_2
HTH_5
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QHJ89098
LinkDB
All DBs
Position
2778905..2779645
Genome browser
AA seq
246 aa
AA seq
DB search
MNDYQRPFEMVKEYKNYSGDPPSPGGSTDLVLEHIGLVQRIAMHLKARLPDYVELEELVQ
IGMIGLLEAFKSFDESQGDDLASFATKRIRGAILDEVRRRSPLSRQDNIHAKTREAIIDD
HLARTGRRPSAVEISSEMGVTLEDYHRSEMKTHTYQLSSYEVLTENGFEQAHDADSPDEE
IEHSQTLGILETRIGQLEQRDQLILSLYYEKELNLKEIGSILNISESRVSQLLSKIVTQL
RAEVRL
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgactatcaaagaccatttgagatggtaaaagagtataaaaactactcaggcgac
ccaccatccccaggaggatcgaccgatctggtcctagagcacataggccttgtccagagg
attgcgatgcatctgaaggcacggcttccagactatgtcgaattagaagagctcgtgcaa
attggtatgatcggtctgttagaggcttttaaaagctttgacgaatcccaaggagatgat
cttgcatccttcgcaacaaagagaattcgcggcgcgattctagatgaagtaagaaggcga
tcacctctgtcacggcaagacaacatccatgcaaaaaccagagaagcgattatagatgac
cacctggctagaacgggtagacgtccgtccgcggtcgagatctcgagtgaaatgggtgta
actttagaagactaccaccgctctgagatgaaaacacatacctatcagttatcgtcatac
gaggtactgacggaaaacggtttcgaacaagcccatgatgctgattcaccagacgaagag
atagaacattctcagaccttaggtattttagagacaagaattgggcagcttgagcagcga
gatcagttaattctctccctatattacgaaaaagagcttaacctaaaagaaatcggttcg
atattgaacatcagtgaatcgcgtgtaagtcagcttctgagtaaaatcgtgacgcaacta
cgtgcggaagttagactttaa
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