Aequoribacter fuscus: EYZ66_14055
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Entry
EYZ66_14055 CDS
T07243
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
afus
Aequoribacter fuscus
Pathway
afus03420
Nucleotide excision repair
afus03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EYZ66_14055
03430 Mismatch repair
EYZ66_14055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afus03400
]
EYZ66_14055
Enzymes [BR:
afus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EYZ66_14055
DNA repair and recombination proteins [BR:
afus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EYZ66_14055
MMR (mismatch excision repair)
Other MMR factors
EYZ66_14055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
QHJ89345
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Position
complement(3064952..3067099)
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AA seq
715 aa
AA seq
DB search
MDVTELLDGLNPAQREAVAAEPGNALVLAGAGSGKTRVLVHRIAWLIRAEGFSPQSLLAV
TFTNKAAKEMRGRTESMLGLSTHGFWVGTFHGLAHRLLKAHWREAGLQQNFQILDSDDQL
RLVKRIVKELGLDDGRWPPKQIQGFVNAQKDEGLRAKHIDAGGDFYLQTMVKAYTAYEEA
CERSSLVDFAELLLRAHELWLNQPTLLKHYQNRFRHILVDEFQDTNTVQYAWLRVLAGTQ
IPVMAVGDDDQSIYGWRGAKIENIQRFSQDFSDTQTIRLEQNYRSTQTILKAANGVIDNN
FGRLGKDLWTEGDEGEKIDLYAGFNEHDEARFIVDRIDAWHRDGNPRASVAVLYRSNAQS
RVLEEAFLRADIPYRIYGGQRFYERLEIRNALSYMRLVHNRNDDAAFERVINTPTRGIGA
KTIETLRAVARDHSQSLWQSAIQLCGSGLPARASSALQGFLSLIETLDEQTDGLALGELT
DHVVERSGLIAFHQKEKGERGQARVENLQELVVAAGQFRADDESITPLQQFLDNAALDAG
EGQAEDFEDSVQLMTLHSAKGLEFPLVFLAGMEEGLFPHQMSSQDPTRLEEERRLCYVGI
TRAMQKLVLTYAETRRMHGSENYNAISRFVREIPDTCLQEVRLQSTVTQPVSRVTQNVAV
PDANVSLGQRVYHQIFGEGMVVNFEGRGSHARVEVNFDTEGTKWLVLHYANLQSI
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgactgaattattagatggactcaatcccgcgcaacgcgaagccgttgccgcg
gagcctggcaatgctttggtactggcgggcgctggtagcggtaaaactcgagtgcttgtg
catcgaattgcttggcttattcgtgcagaggggttttcaccccaatcgcttctggcggtt
acgtttaccaataaagccgcgaaagaaatgcggggccgcactgagtccatgctgggttta
agcactcatggattttgggtggggacctttcacggacttgcccaccgcttgcttaaagcc
cattggcgcgaagccggtctacagcaaaattttcagatcttagatagcgatgatcagttg
cgtttggtgaaacgcattgtcaaagagctgggtttagacgatggacgctggccacccaaa
caaatccagggttttgttaatgcgcaaaaagacgaaggtcttcgagctaagcacatcgat
gccggtggtgatttttatttacaaaccatggtcaaagcttacacggcttacgaagaggcg
tgtgagcgtagcagcctcgttgattttgccgaattattattgcgtgcgcatgagctttgg
ctaaaccaacccaccttgctcaagcactatcaaaatcgatttcgccatattctggtcgac
gaatttcaagataccaatacggttcagtacgcttggcttcgcgttctggcgggcacccaa
attcccgttatggctgtgggtgacgacgatcagtcgatctatggttggcgcggcgccaaa
atcgaaaacattcagcgtttcagccaagattttagcgatacgcaaacgattcgcttagag
cagaattaccgctcgacccaaaccatactcaaagccgcgaatggtgttatcgacaataat
ttcggccgcttaggtaaagacctttggaccgagggcgacgaaggcgaaaaaatcgatttg
tacgcgggctttaacgagcacgatgaagcccgctttattgtcgacagaattgacgcttgg
catcgcgacggaaaccctcgtgctagtgtcgcagtgctgtaccgatccaacgcgcaatcg
cgtgtattggaagaagcgtttttgcgcgccgacattccctaccgaatttacggtggtcag
aggttttacgagcgtctggaaattcgcaatgcactgtcctacatgcgtttggttcacaat
cgcaacgatgacgctgcgttcgagcgggtgattaacacgcccactcgcggtattggtgcg
aaaaccatagaaacactcagagctgtagctcgcgatcattcacaatcattatggcagtca
gcgattcagttgtgtggttctggtttacccgcccgagccagctctgccctacaaggtttt
ttgtcgcttattgagaccctagatgagcaaacggatggtttagctttgggtgagttgacc
gatcatgtggtcgagcgttcgggtttgattgcctttcaccaaaaagaaaagggcgagcgt
ggtcaggcgcgggtcgagaacctacaggaattggtggtcgccgccggtcagtttcgtgct
gacgacgaaagtatcacgccacttcaacagtttttagataatgcggccttagatgcggga
gagggacaagctgaagattttgaggacagcgttcagctaatgacactgcactcagccaaa
ggtttagaatttccattggtgtttttagctggcatggaagagggtttgttcccccatcaa
atgtcgagccaagatccgacgcgcctagaagaagagcgccgtctttgctatgtaggtatt
actcgcgccatgcaaaagttggtgctcacttacgcagaaacgaggcgcatgcatggttct
gaaaactacaacgcgatatctcggtttgtgcgcgaaatacctgacacatgcctacaggaa
gtccgattgcagtctactgtaacgcagcccgtgagtcgtgtgacgcaaaatgttgccgta
cccgacgccaacgtgagtttgggacagcgcgtataccaccagatttttggtgagggtatg
gtggtgaatttcgaggggcgtggcagccatgctcgagtcgaagtaaacttcgataccgag
gggaccaagtggttggtgcttcactacgctaacctacagtcgatttaa
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