KEGG   Ammonicoccus fulvus: AADG42_07855
Entry
AADG42_07855      CDS       T10995                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
afuv  Ammonicoccus fulvus
Brite
KEGG Orthology (KO) [BR:afuv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:afuv03016]
    AADG42_07855 (truB)
Enzymes [BR:afuv01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     AADG42_07855 (truB)
Transfer RNA biogenesis [BR:afuv03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    AADG42_07855 (truB)
 Prokaryotic type
    AADG42_07855 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB_C DKCLD DUF6220 PseudoU_synth_2
Other DBs
NCBI-ProteinID: XAN07209
LinkDB
Position
1651558..1652463
AA seq 301 aa
MSAPAPAGQPLAGIAVVDKPAGWTSHQVVGRCRRIFGTRKVGHAGTLDPMATGILLVGVN
RATRLLGHLMLTEKEYAATIRLGIATVTDDAEGETIATPGCAGVPEAELTSAIATFVGDI
LQVPTAVSAIKVDGQRAYARVRAGEEVALKARPVTVHEFTLLGMSESDVDGVPVLDCDVR
VRCSSGTYIRALARDLGALLDSAGHLTALRRTRVGPFGLDQARPISAETTELPVLDLATV
ARACFPVVEVDEAGAREVGYGRPLPGISLSGITAVLHRDRFLALYRPGDRGSDAVAEAVF
V
NT seq 906 nt   +upstreamnt  +downstreamnt
atgagcgcacctgcgccagccgggcagcccctggccggcatcgccgtggtcgacaagcct
gcgggctggacgtcgcaccaggtcgtcggacgctgccgccggatcttcggcacgcgcaag
gtcggtcacgccggcacgcttgatccgatggcgacgggcatcctgctcgtcggggtcaac
cgggccacgcgactcctcgggcatctgatgctcaccgagaaggagtacgccgccacgatc
cgtctgggcatcgccacggtgaccgacgatgccgagggggagaccatcgcgaccccgggc
tgtgccggcgtacccgaggcggaactcacgtccgccatcgccacgttcgtcggcgacatc
ctccaggtcccgaccgcagtgtcggccatcaaggtcgatgggcagcgggcgtacgcccgg
gtccgggcgggggaggaggtcgcgctgaaggcgcggccggtgacggtgcacgagttcacg
ctgctggggatgagcgagagcgacgtggacggcgtacccgtcctcgactgcgacgtgcgc
gtccgatgctcctccgggacctatatccgggccctcgcccgggacctcggcgcgctgctc
gacagcgccgggcatctcacggcactgcggcgtacgcgggtcggcccgttcggactggat
caggcccggccgatctcggcggagaccaccgagctgcccgtccttgatctggccaccgtc
gctcgggcctgttttcccgttgtcgaggtcgacgaggcgggtgcgcgggaagtcggctat
gggcggccgttgcccgggattagcctcagcgggatcaccgcggtgctgcacagggaccgt
ttccttgcgctctatcgaccgggcgaccggggcagtgacgccgtcgcggaggccgtcttc
gtctga

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