Ammonicoccus fulvus: AADG42_16065
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Entry
AADG42_16065 CDS
T10995
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
afuv Ammonicoccus fulvus
Pathway
afuv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afuv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AADG42_16065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afuv03019
]
AADG42_16065
03400 DNA repair and recombination proteins [BR:
afuv03400
]
AADG42_16065
Enzymes [BR:
afuv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AADG42_16065
Messenger RNA biogenesis [BR:
afuv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AADG42_16065
DNA repair and recombination proteins [BR:
afuv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AADG42_16065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HTH_IclR
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
XAN08756
LinkDB
All DBs
Position
3357317..3359608
Genome browser
AA seq
763 aa
AA seq
DB search
MSDRWNDEPPPDWESLPPDPFDDEPEDRFEAMAPEPAARAVPAPRSVARGADGLAEEALA
ILRDLTGRPDANFHDGQFEAIEALVAHHRRALVVQRTGWGKSAVYFISALLQRRAGAGPA
LIVSPLLALMRDQVAAAERAGVRAAAINSANVTEWADIERQLDRDTVDVLFVSPERLVNP
KFRAEQLPRLVATAGLLVIDEAHCISDWGHDFRPDYRRIRSLIAELPGGVPILATTATAN
QRVVDDVAEQLGAGGHEVFTLRGSLARDSLRLGVLDLGTQWRRLAWLRQHLADLPGSGIV
YCLTVAAAEDTAAMLATAGHRVLAYTGRTDPADRLVAEDALKRNEVKALVATSALGMGFD
KPDLGFVVHLGAPSSPVAYYQQVGRAGRATASADVLLLPGIEDREIWHFFATNAMPTQAK
ADAVLGALEAEGKPLSLAALEARVDIRRGQLELLLKVLAVEGAVQAVQGGWTVTGAPWVY
DAERYERIAAARVAEQDAMVAYENLSAPACRMVFLTGELDDPDTTPCGRCDTCTTPWYAT
EVSTESLADAQASLDRVGVPIAPRAQWPTGLDRVGVSADGKPVRGKIIPGEQVAEGRVIA
RLTDLGHGNALRALFANDEGGRPLDAEVPADLAQACLRVLKEWGWATRPVAVIWIPSLDR
PRLVESLATGIAQAGRLRLLGPLEVSPGSPPPAEQTNSVYRVRDLWQRFRVPDAMAAEIR
ALGGPVLLIDDLIDSRWTLTIAGRLLRRAGAGGVLPLALASIA
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcgctggaacgacgaaccgccgcccgattgggagtcccttccaccggatccc
tttgacgacgagccggaggaccggttcgaggcgatggcgcccgagccggcggcccgcgcg
gttccggccccacgttctgtcgcgcgcggcgccgacgggctcgccgaggaagcgctggcg
atccttcgcgacctgaccggacgccccgatgcgaacttccacgacggccagttcgaggcg
atcgaggcgctggtcgcccatcatcgccgcgcgctggtcgtgcagcgcaccggctggggc
aagtcggcggtctatttcatctctgccctgctgcagcgtcgcgcgggtgccgggccggcg
ctcatcgtttctcccctgctggcgctcatgcgggatcaggtggcggcggcggagcgggcg
ggcgtacgcgcggcggccatcaactcggcgaacgtcaccgaatgggccgacatcgagcga
cagctcgaccgggacacggtcgatgtcctcttcgtctcccccgagcgcctggtcaacccg
aagttccgcgcggagcagctcccgcgcctcgtcgcgaccgccggactgctggtgatcgac
gaggcacactgcatcagtgactggggccacgacttccggcccgactaccggcggatccgt
tcgctgattgcggagctgcccggtggcgtgcccattctggcgacgaccgccaccgccaac
cagcgcgtggtcgacgatgtggccgagcagctgggcgcgggcggtcacgaggtcttcacc
ctgcgcggatcgctggcccgcgactcgctgcgactcggcgtgctcgatctgggcacgcag
tggcgtcggctggcgtggctccgccagcatctcgccgacctcccgggcagcggcatcgtc
tattgcctgacagtggccgcggcggaggacacggcggcgatgctggccacggccggtcac
cgggttctcgcctataccgggcgcaccgatccggccgaccggctggtggccgaggacgcg
ctcaaacgcaacgaggtgaaggcgctggtggccacctccgcgctcggcatggggttcgac
aagcccgacctcggtttcgtggtccatctgggagcgccgagttcgccggtggcctactac
cagcaggtcggccgagccggccgcgccaccgcaagcgccgatgtgctgctgctgcccggc
atcgaggaccgggagatctggcacttcttcgccaccaatgcgatgccgacccaggccaag
gccgatgccgtcctgggcgctctcgaagccgagggcaagccgctgtccctcgccgcgctg
gaggcccgtgtcgacatcaggcgcggccagctcgagttgctgttgaaggtgctcgcggtg
gagggcgccgtgcaggcggtccagggtgggtggacggtcaccggggcgccgtgggtctat
gacgccgagcgctatgagcgcatcgccgccgcgcgcgtcgccgaacaggacgcgatggtg
gcctatgaaaatctgtctgcccccgcgtgccgcatggtcttcctcactggtgagctggac
gaccccgacaccacgccttgcgggcgctgcgacacctgcaccaccccctggtacgccaca
gaggtctcgaccgagagcctcgcggacgcccaggcctcgctggaccgggtcggtgtcccg
atcgcgcccagggcccagtggccgacggggctcgaccgggtgggtgtcagtgcggacggc
aagccggtgcgcggaaagatcatcccgggtgagcaggtcgcggagggccgggtcatcgcg
cgcctcaccgacctcggtcacggcaacgccctgcgggctctgttcgccaatgacgagggt
ggtcgcccgctggatgccgaggtgccggccgatctggcgcaggcctgcctgcgcgttctc
aaggaatgggggtgggccacccggccggtcgctgtcatctggattcccagcctggaccgg
ccccgactggtggaatctctggcgaccgggatcgcacaggcgggacgcctgcgtctcctg
ggccccctggaggtctccccgggatcgccgccgccggcggagcagaccaacagcgtctat
cgggtccgcgacctgtggcagcggttccgggtgcccgacgccatggcggcggaaatccgg
gccctgggcgggccggtgctgctcatcgacgacctgatcgactcgcgctggaccctcacg
attgcgggtcgcctgctgcgccgggcgggcgcgggcggggtcctcccgctggcgctggcg
tcgatcgcctga
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