Aspergillus flavus: AFLA_000621
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Entry
AFLA_000621 CDS
T01090
Name
(GenBank) hypothetical protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
afv
Aspergillus flavus
Pathway
afv03022
Basal transcription factors
afv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
afv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AFLA_000621
09124 Replication and repair
03420 Nucleotide excision repair
AFLA_000621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afv03021
]
AFLA_000621
03400 DNA repair and recombination proteins [BR:
afv03400
]
AFLA_000621
Transcription machinery [BR:
afv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AFLA_000621
DNA repair and recombination proteins [BR:
afv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AFLA_000621
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
DUF5357
Motif
Other DBs
NCBI-ProteinID:
KAF7618978
LinkDB
All DBs
AA seq
629 aa
AA seq
DB search
MAPPSGSAAYKKKDGTLTMSQDRQSISWIPAAGGATGTITLSVSQITNLQQTPASNPKVM
LKIFVLPPDAPDNSPEQYVFNFTAGANARAEADAIKDALSAAIQAAKTAQAAPTPSPAPG
AGEGMSTAMAFASAVSSKSTWDNDKWLKGDVELQQSLLKSDPNLQRMFMESLHTKPDTLT
AGQFMSQFWSTRIHLLRAHAIERSQTRGSYNVLSTLKPRVEDNVTKLNISKEQIQLIFNQ
HPLVRRVYDENVPKLSEAQFWSRFFQSRLFKKLRGERLSETDATDAILDKYLQADEHGNL
PREAHVPHFLNLEGNEVNNSQRRGNRPDLDMRWSAPDKVPIIRTLNSLSEKIMANVAPAD
GDPHAPVGMDEDTYNELQLRDLRGDEEADRVLLNIRDQSRFFSAQAKDSEDEQNRLFAQQ
DPEKILSDLRKEIEQNLPDDGTAPLGRLVEPDELGDEKESNQQPGSRVSLQKSSAQIIAA
IRDRRAQTDVSSTTGTYGLSSGLYDRLNLTHATTTEFLHQFWQAFLSGNPDRAAELSSLV
DSLSRAMERIKAVAQDAEAERQVEVDRKKRHAREVMEATGKKPRLNLSSIQGGEKVVNQL
MGPTIQALETAQAKYKAALAEEMKETSAQ
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggcacctccgagcgggtcggcggcatacaagaagaaagatggcaccctgaccatgtcc
caggatcgccagtcgatctcttggatcccggcggctggtggtgcgacgggaacgatcacg
ctgtctgtttcccagattacgaatctacaacagaccccagcaagtaacccaaaagtcatg
ttgaagatctttgtccttcccccagatgcgccagataattctcccgagcagtacgtcttc
aactttaccgctggagccaacgcgcgtgcggaagcggacgctattaaagatgcactcagc
gcggccatccaggcagcaaaaacggcacaagctgcgcctacaccgtctcctgcccctggc
gcgggcgaaggtatgtctacggccatggcgtttgcaagtgccgtttcgtccaagagcacc
tgggataacgacaaatggctaaagggcgatgtggagctacaacagtcattactcaagtcg
gatccgaacctgcagcgcatgttcatggagtcgctgcataccaagccggataccttgacc
gcgggccaattcatgtcgcaattttggtcgacccgtattcatcttctgcgcgctcatgcc
attgaacggtcgcagacgagaggttcttacaatgtgctatcaacgctgaaaccgcgcgtg
gaagataatgtgaccaagttaaatatcagcaaagagcagattcagttgattttcaaccag
caccctctcgttaggcgtgtgtatgatgagaacgtacccaagttgagcgaggcacagttc
tggtcccggttcttccagagtcgattgttcaagaaattacgcggagagcggctttcggaa
actgatgccaccgatgccattctggacaaatatctgcaggcggatgagcacggtaatctc
ccacgggaagcgcatgttccgcattttcttaacctagagggcaatgaggtgaataatagt
cagcgccggggaaatcgacctgacctcgacatgaggtggtctgcaccggacaaggtgccc
atcatccgaaccttgaacagcttaagtgagaagatcatggcgaatgtcgcaccggctgat
ggtgatccgcatgcaccagtcggtatggatgaggatacatataacgaattacaactacgc
gacctgcgcggtgatgaggaggcggaccgcgtcctgttaaatattcgagaccaaagccgg
tttttctccgcccaagccaaggactccgaagacgaacaaaacaggctgttcgctcagcaa
gatccggaaaagattctaagtgacctacgcaaggaaattgaacagaatctacctgacgat
ggtaccgcgccgctgggcagacttgtcgagccggacgaactcggtgacgagaaggaaagc
aaccaacagccggggtctagagtcagtctgcagaagtcttcggcgcagatcattgccgcg
attcgggatcgtcgagcccagacggatgtgtcctccactactggcacatacggtctgtcg
agcggcctctacgaccggttaaacttgacacatgctactacgacggagtttctgcaccag
ttttggcaggcgttcctatcaggcaaccctgatcgtgcggcagaattatcatccttggtc
gactcgttgagtcgggccatggagcgaattaaagcagtagcacaggatgcagaggcagag
cgacaggtggaggtagatcggaagaagcgtcatgcgcgagaggtcatggaggccactggc
aagaagcctcgactcaatctgtcaagcatacaaggtggtgaaaaggtggtcaaccaactg
atgggacccactattcaagcactagaaacagcgcaggcgaagtataaggcagcgttggcg
gaagagatgaaggagacatccgcgcaatga
DBGET
integrated database retrieval system