Aspergillus flavus: AFLA_001130
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Entry
AFLA_001130 CDS
T01090
Name
(GenBank) hypothetical protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
afv
Aspergillus flavus
Pathway
afv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AFLA_001130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afv03019
]
AFLA_001130
Messenger RNA biogenesis [BR:
afv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AFLA_001130
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
AFLA_001130
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
CNOT1_HEAT
ARM_Cnot1
Zemlya
Motif
Other DBs
NCBI-ProteinID:
KAF7619504
LinkDB
All DBs
AA seq
2342 aa
AA seq
DB search
MTFPPPPPSSQSSIASGTDKSSTIRPGRSQQSAWGPSVSQSSVRRGLTPLATNNLASSSF
PSASSRGPPQSSSPGPGGSTSSPLTSSFSAVLSSARGFPGSRNAPSPASTPSPFTSFQSG
SQQHQQPGQSLSSPKFRAHTPSSGSHLASTAGSIAGGGGSGGGGGGTGSSRGATFSPLSS
GTTVNSPTGFPSDKSGSAAAAHASQSSLTKISIAQVFLLLDSITEKEGREKWDTKAAQIH
KLVESNGMEVFSKYFRRLLTGNAPQIFPGVNKSVENAGNYPLLVQEMQKVSQDIEQAQKI
AETVDTSEGDIFRDFDLSTFLDHFKLDPILKVSLALAFKMANKSDLRAKADAILSNSIPP
FLQSLATPSEITKDYKNACIGMTIERFILYPPRNFTDEVKAKLVYAANLRYTRLGVEMPF
EIASALQMFNFINPRYTLVRQLHSKGPKATSNPDAVTEAINSAGSECWNEEHLASALLFL
VLSQYWQEFSLETFLAAVKSHYGEKQISWPLIFRNFDREGLRLDAKQFAKLYSALLAAAS
EDPTLDVQKLWGGDWEHRDTQLSFLTAFLVSRTDVSQIPNLRATFPPDFFADGPELVRLQ
GERAAKSPLRSLDAMRALFDLSLFSQASWAVAESQLLIKAIVQYDLPVFLCSALTLPQPW
TTVQQSFVLRTLVVFILKQEEGYQLALHGAWRQDKQWVAEQLFTTFTQDPTSTAAIYEHA
VEYNWLDFLLGYTNGLAMDLACYAHRKGPFDLEQWVRNAAQKGPMDMGSLLSKFLRIKAE
DELHVQRKEQPAPQMVSLSVKTVYTLLSVLEEYVGDRENLTPVQRICIQTYPRLINYGEG
FDDIIDANGENGNSLPETVDKQMQELFGKMYHEELSLREILELMRRYKSSREPAEQDLFA
CMVHGLIDEYHCYHEYPLEALTKTAVMFGGIINFRLVDGITLKVGLGMILEAVREHDMHD
PMYKFGVEAIEQLINRLPEWAGFCHLLLQIPTLQGSPIFQKAEEVLREQGSQARDSDTGR
LDNASAGSITNGNVVDETTAADGTSRKFISVHVDPPLRPEVYNDPDEDVQDKILFVLNNV
SEQNIEEKLQDLTDVLRDQHHQWFASYLVEERAKLQPNFQQLYLDLLDRINDRVLWAEVL
RETYVSVSKLLNSEATLNNSTDRGHLKNLGLWLGSLTIAKDKPIKHKNVYFKGLLLEGYD
SQRLTIVIPFTCKVLVQATKSTVFNPPNPWLMDILALLMELYHFAELKLNLKFEIEVLCK
DLDLDHKAIEPSVIIRDRSAHIEDALSTANIPEGLEAFEDMALSSINQGIRHERLSPAAI
MSTLPSLDKILVLPSSASSMVDPNVLRQIVHSSVERAIAEIITPVVERSVTIASISTVQL
VSKDFAMEPDEEKVRHAAGIMVRQLAGSLALVTCKEPLKVSMTNYIRMIQQEYSDQPMPE
GLILMCVNDNLDAACGIVEKAAEEKSLPEIEKVIEPQLEARRRHRAARPNEPFIDPSMNR
WGLFIPEPYRQAPGGLNKEQLAIYEEFARQSRGPGTAHIPNVSTDSARIQDVLQDPYTAI
PNLSTPAEQPAVPHRTPQAQQDARLQQSGLVSAQSQLNGFLEAQSPREKVESIVSDLQQA
ARNASEERVRDLGRDSGVLQEYNQALRAILASPNGEELARLTSLKICTSLFSQTQGTLEI
EVLVHLLAKLCDMSSLVARYTWAVLSEVDDEHMFNVPVTVALIDAGLLDIRRVDMILTRL
ILQKNTSALDVLANLMDRVLFSEEPSALRSDFSGSLEAMSQWLAEDSGLSTASDIINKLR
ESGIPEVVNPLLSDKARSKRDQMEYIFSEWIGIYKAPGAIDRTYYSFLKDIHERQVMDNQ
EDSALFFRLSIDISVAMFEHESQNPNGSLDEAYLYIDALAKLVVLLVKFQGETPGATKTS
KSVYFNSILSLLVLVLNHHHVMRGEAFNQRVFFRLFSSILCEYSLNGLQQSEQHQEMMFA
LANIFLSLQPKYCPAFVYGWLALVSHRFFMSGMLNMPERTGWGPYCEIMQALLAYIGEQL
KPANISYVIKDMYKGVLRILLILHHDFPEFVAENHFQFCNVIPAHCAQLRNLVLSAYPSS
FHKLPDPFREGLKVERLEEMREAPKIAGDTAAPLQQANIKSVVDSSLQGGNASEAALQQI
CEAVYNPTTKETGLFYTPINVNVVLLNALVLYIGQSAVSANAPKGNTRAAFDNSPHSALL
ERLAKALRPEARYYLLSAMANQLRYPNSHTYFFSFAILRLFGSDYSEQDESDIRQQIIRV
LLERLIVHRPHPWGLIITLQELLQNRSYTFFRLPFIQAAPEIGRLFDALLQHIQQQSPRA
LA
NT seq
7029 nt
NT seq
+upstream
nt +downstream
nt
atgaccttccctccccctcctccttcctcccaatcgtcgattgcttctggcaccgataag
tcttccacgatcagacctggaaggtcacagcaatctgcctggggtccatccgtgtcccag
tccagcgttcgccgtggactgactccgcttgcgaccaacaatctcgcatcgtcatctttc
ccctcagcctcttcccgagggccacctcagtccagtagtcctggtccgggcggttcaact
tcatctcctttgacctcctccttctctgcggttctgagttccgcacgaggctttccaggc
agccggaacgcgccctcacctgcctccacgccgtcacccttcacctccttccaatctggc
tcgcaacaacatcagcagcccggacaatctctctcgtctcctaagttcagagcccatacc
ccgtcgtctgggtcacatctggcttccacagcgggctctatcgcgggtggtggaggctcc
gggggaggcggaggtgggacgggatcttccagaggcgccaccttctctccgttgtcatct
gggacaacggtaaactcacctacagggtttccttctgacaaatcgggctcggcagctgca
gctcacgcaagtcagtcttcgctaacaaaaatatctatcgctcaagtgtttcttctccta
gattcaattacggagaaagaaggtcgagagaagtgggacacgaaagctgctcagattcac
aaacttgttgagtccaacggcatggaggtcttttccaaatatttcaggcgccttctcaca
ggcaacgcccctcagatctttcccggtgtgaataagtctgtggaaaatgccgggaactat
cctctcctggtacaagagatgcaaaaggtatctcaagacatcgaacaggcccagaaaatc
gcggagacggtagatacttccgagggcgatattttccgagatttcgacctttcgactttt
ctggatcatttcaagcttgatcctatcttgaaggtttcacttgcgctggctttcaagatg
gctaacaagtcggacttgcgcgcaaaggctgatgcaatcctctccaactcgatacctcca
ttcctccaaagcctcgccaccccgtcggagataaccaaggactataagaatgcttgtatc
ggaatgacgattgagcgcttcatcctgtacccaccgcgcaatttcacagacgaagtgaag
gctaagctcgtatatgcggccaatctacgctatacgagactgggcgtggagatgcctttt
gagattgcatctgccctgcaaatgttcaatttcatcaacccgagatataccctagtccgt
caactgcactcaaaggggccgaaagcaacttcaaacccagacgctgtgactgaagccatc
aattcagctggctccgaatgctggaatgaggaacatcttgctagtgcactgttattcttg
gttctgtctcaatattggcaggaattttccctggaaacattccttgcagctgtcaagtca
cattacggtgaaaaacaaataagctggcctctgattttccgaaattttgatcgggagggc
ttgaggctagatgcaaaacaattcgccaagctatattcggctctcttagcagctgcttcc
gaagacccaaccttggatgttcagaaactttggggcggtgattgggaacatcgtgacact
cagctgtcctttctcacagctttccttgtctctcgaacagatgtgtcgcagatccccaac
cttcgcgctactttccctccagacttttttgcggatggccccgagcttgttcgtttacaa
ggagaacgtgcagcaaaatcacccctacggtctttggatgccatgagagctttgttcgac
ctctccttgttctctcaggcctcctgggcggtcgccgagagccaactgctcatcaaagcc
atcgttcaatatgacctccctgtgttcctatgctcggcgctgacccttccacagccgtgg
acgaccgttcagcaaagcttcgtcctccggacactagtcgtttttatactaaagcaagag
gaaggataccagttagccctgcatggagcgtggcgtcaagataagcaatgggtggcggag
caacttttcactacgttcacacaagatccgacttctactgctgccatatacgagcatgct
gtcgaatacaattggctggatttcctactaggatacacaaatggcctcgctatggatctt
gcttgttacgctcaccgtaagggacctttcgatctggaacaatgggtgcgcaatgctgct
caaaagggtcccatggatatgggcagcttattatccaagtttctgagaatcaaagcggag
gatgagcttcatgtccaaaggaaagagcaacccgcgcctcaaatggtcagcctttctgtg
aagaccgtctataccttgctgtcagtcttggaggaatacgtcggtgatcgtgagaacctc
acaccggtgcaacggatctgtatccagacgtatcctaggttgatcaactacggagaaggt
tttgatgatattatcgatgccaacggtgaaaacgggaactctttgcctgagaccgttgac
aagcaaatgcaggagttgttcggcaagatgtatcatgaagagctgtccctgagagaaatt
ctcgagttgatgagacgatataagtcctcgcgcgaacccgctgagcaagatttgttcgct
tgtatggtccacggactcatcgacgagtatcattgctaccatgagtatccactggaagct
ctcacaaagacagctgtcatgtttggtggtatcattaacttccgacttgttgatggtatc
accttgaaggtcggtttgggcatgattttggaagctgttcgcgaacatgacatgcacgac
ccgatgtacaaatttggagttgaagctatcgagcagttgatcaaccgccttccagaatgg
gctggcttctgtcatctgttattgcagattccgactttgcaaggctctccaatctttcaa
aaagccgaagaggtgcttcgcgaacaaggaagccaggcccgcgactccgatactggcaga
ctcgataatgcttccgctggatctataactaatggtaatgttgtggatgagactactgcc
gctgatgggacaagtcgcaaattcatttctgtacatgttgatccccctctccgacctgaa
gtctacaacgaccccgacgaggatgttcaggacaagattctatttgtactgaacaacgtc
tcggagcagaatatcgaggagaagctacaagatctcaccgatgttcttcgggatcaacac
caccaatggtttgcttcgtatttggtagaagaacgggccaaactgcagcctaatttccag
cagttgtatcttgatctccttgatcgcattaatgatagggtgctttgggcggaagttctg
cgagaaacatacgtcagcgtttctaagctgctgaattccgaggccactttgaataattcc
accgaccgtggacacttgaagaaccttgggttatggctcggatccttgactatcgcaaag
gataagccaatcaaacacaaaaatgtttactttaaggggcttctcttggaaggttatgac
agccaacgcctgacgatcgtgattccattcacttgcaaggtgttggtccaggctaccaag
tctacagtcttcaatccgccaaacccttggctcatggatatcctggcacttttgatggag
ctttatcactttgcagaattgaagctgaatctcaagtttgaaatcgaggttctatgcaag
gaccttgatcttgatcacaaagcaattgagccgtccgtcatcattcgggaccgttcagcg
cacattgaggatgcgttgtcgacagccaacattcctgaaggtctcgaagcgtttgaagac
atggcacttagcagcatcaaccaaggcattcgtcacgaaaggctatcacccgccgctatt
atgtcgacactgccaagcttagataagatccttgtcctgccgtcgtccgcaagcagcatg
gttgaccccaacgtccttcggcaaattgtacacagttctgtggaacgtgctattgcagag
attattacgcctgtggtagaacggtcagtaacaattgcctccatatcgacagttcaattg
gtgtcaaaggatttcgctatggagcccgacgaggagaaggtccgacatgcggctggcata
atggttaggcaacttgctggtagcctggcccttgtcacttgcaaagagcctctgaaggtc
agcatgaccaactatatccgtatgatccagcaggagtattcggaccagcctatgcctgag
gggcttatactaatgtgtgttaatgataacttggatgccgcctgcggcattgtggagaag
gcagcagaagaaaagtcgcttccagaaatcgaaaaggtcattgagccgcagttggaagcc
cgtcgccgtcatcgtgcggcccggcctaatgaaccattcattgatccatctatgaatcgc
tgggggcttttcattcccgagccttatcggcaggcacctggtggactcaacaaagagcag
ctggctatctatgaagagttcgcccgccagtctcggggccctggaacagctcatatcccc
aatgtttcgacagactctgcccgcattcaagatgttctacaggatccttataccgccata
ccgaacctttccacacctgcagagcagcctgctgttcctcacaggacaccacaggcgcaa
caggatgccagattgcagcagtctgggctcgtaagtgcacagtcgcagctcaatggtttc
cttgaagcacagagtccacgcgagaaggttgagagcatcgtttccgatcttcaacaagct
gcaagaaatgcgtctgaggaacgtgttagagacctcggaagagacagcggcgtcctacaa
gagtacaaccaagccttgcgggctattctcgcatctcccaacggtgaggaactggcgcgg
ttgacgtcgctcaagatctgcacaagtctattctcgcaaactcaaggcacattagagatt
gaagtactcgtacatcttcttgccaagttgtgtgatatgtcgtctctagtagcacgatac
acctgggcggtcctatcggaagttgatgatgagcacatgttcaatgtcccagttacagtc
gctctcattgatgctggacttttggatattcgtcgcgtcgatatgatattgacaaggctt
attcttcagaagaatactagtgctctagatgtccttgccaatttgatggaccgtgttctt
ttcagcgaagagccttccgccttgaggtctgacttctcaggcagtcttgaagctatgagc
cagtggcttgcagaagactccggtctttcaactgccagtgacattatcaacaaattgcgc
gagtctgggattcccgaagttgttaaccctctactcagcgataaggcgagatcgaagcgt
gatcaaatggaatacatcttcagcgaatggatcggaatttacaaggctccaggcgccatt
gatcgcacctattattctttcctcaaagatatccatgagagacaagtcatggacaaccaa
gaagattccgccttattcttccgtcttagcatcgatatttccgttgcaatgtttgagcat
gagtctcaaaatcctaatggcagccttgatgaggcctacctctatatcgatgccctcgca
aaactggttgtacttcttgtgaaattccagggtgagacgccaggagctactaagactagc
aagtcagtctacttcaattcgatcctgtcattgctggtgctcgtcctcaaccaccatcat
gttatgaggggggaagctttcaaccagcgcgtcttcttcaggctcttctcaagtatcctt
tgcgaatattccttgaacggccttcaacagagcgaacaacatcaagagatgatgttcgcc
ttggctaacatattcttgtcactccaacccaagtactgccccgcatttgtttacgggtgg
ctagcgttggtctcgcacaggttcttcatgtcaggtatgttgaacatgccagagcgtaca
ggctggggcccttactgtgagatcatgcaagctcttcttgcctatatcggcgagcaactc
aagcctgcaaatatctcctatgttatcaaagacatgtataagggcgtgcttcgcatccta
ttgatcctgcatcatgacttccccgagtttgtggcggaaaaccatttccagttctgcaat
gttatccccgcacactgcgctcagcttcgaaaccttgtcctgagcgcctatccgtcatcc
ttccacaaactcccagatccgtttagagagggtctgaaggtggaacggctggaggagatg
cgggaagcgccaaagatcgctggtgacacggcagcgccactccagcaggccaacatcaag
agtgtggttgactcgtcgcttcagggcggaaatgcgtcggaagcggctttgcagcagatt
tgcgaagccgtgtacaacccgactaccaaagagaccggtctcttctacacgccaatcaac
gtcaacgtcgtgcttctgaacgcattagtgctctacatcgggcagagcgctgtctctgcc
aatgcacctaagggcaacactcgtgcagcatttgacaattcccctcattcagcccttctt
gagagattagcgaaagccttgcggcctgaggcgcgctattaccttctgagcgcgatggcg
aaccagcttcggtatcctaacagtcacacctacttcttcagtttcgcgattctccgtttg
ttcggttccgactactcggaacaggatgagtccgacattcgccagcagattattcgggtg
ctacttgagcgacttattgttcatcgtcctcatccttggggattgattataactctgcag
gaactgcttcagaatcgaagctacacctttttccgtcttccctttatccaggcggcgcct
gagatcggacgtttattcgatgcactcctgcagcacattcaacagcaaagccctagagcg
ttggcctag
DBGET
integrated database retrieval system