Aspergillus flavus: AFLA_001198 Help Entry AFLA_001198       CDS       T01090                                  Name (GenBank) hypothetical protein   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism afv  Aspergillus flavus Pathway afv03020   RNA polymerase afv03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:afv00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     AFLA_001198   09124 Replication and repair    03420 Nucleotide excision repair     AFLA_001198  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:afv03021]     AFLA_001198    03400 DNA repair and recombination proteins [BR:afv03400]     AFLA_001198 Enzymes [BR:afv01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      AFLA_001198 Transcription machinery [BR:afv03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      AFLA_001198 DNA repair and recombination proteins [BR:afv03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       AFLA_001198 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_3 RNA_pol_Rpb1_7 RNA_pol_Rpb1_4 RNA_pol_Rpb1_R SMBP Motif Other DBs NCBI-ProteinID:  KAF7619573 LinkDB All DBs AA seq 1748 aa AA seqDB search MSNVYFPYSKAPLRTIKEIQFGLFSPEEIKRMSVVHVEYPETMDEQRQRPRTKGLNDPRL GTIDRQWNCETCEEGQKECPGHFGHIELATPVFHIGFLTKIKKLLETVCHNCGKIKANTS DSKFLEALRMRDPKRRFDHIWRLSKDITICEADPPPDEDEPYAKESSKPTRMHGGCGNAQ PTIRKEGITLVGTWKPSKSMMDEMDMQQPEKKTITPQMALNIFRNISHEDVRIMGLSNDY ARPEWMVLTVLPVPPPPVRPSVLVGGSTSGQRGEDDLTYKLAEIVRANQNVQRCEQEGAP EHVVREFESLLQYHVATYMDNDIAGQPKAMQKSNRPVKAIRSRLKGKEGRLRQNLMGKRV DFSARTVITGDPNLSLDEVGVPKSIARTLTYPEVVTPYNIDKLQQLVSNGPNEHPGARYI VRDNGERIDLRHAKRAGGQQLLYGWKVERHVMDGDVILFNRQPSLHKESMMGHRVRVMPY STFRLNLSVTTPYNADFDGDEMNLHVPQSEESRAELLQLALVPMNIVSPQRNGPLMGIVQ DTLCGIYKICRRDTFLTKEQVMNLMMWVPDWDGVIPPPAILKPRPRWTGKQIISMALPSG LNLLRVDKDNSALSEKFAPLNDGGLLIHGGQLMYGMFSKKTVGASGGGVIHTIFNEYGPG TAVAFFNGAQAIVNYWLLHNGFSIGIGDTIPDAVTIQRIENCVRERKKEVETITASATDN TLEPLPGMNVRETFESKVSRALNNARDEAGSETEKSLKDLNNAIQMARSGSKGSTINISQ MTAVVGQQSVEGKRIPFGFKYRTLPHFTKDDYSPESRGFVENSYLRGLTPTEFFFHAMAG REGLIDTAVKTAETGYIQRKLVKALEEVMVKYDGTVRNSLGDIIQFIYGEDGLDGAHIEN QRVDIIKCSDDQFRDRFRIDLMDPERSLGPEVLEQANEIAGDVEVQRYLDEEWEQLLKAR AFLRTVAKEDEEMMQLPINVQRILEMARTTFRIREGTISDLHPAEVIPQVQALLDRLLIV RGDDPISQEAQENATLLFKAQLRSRLAFRRLVTEYSMNKLAFQHVIGAIESRFAKANAPA GEMVGVLAAQSIGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEILNVATNIKTPSMTVYQ EPGRTHDKEGAKQLRSVVEHTSLRSVTEATEIYYDPDIQSTVIENDRDMVESYFIIPEDV TDDSSRQSKWLLRIILSRPKLLDKGLTVQDVATRIKQAYPKDIAVIFSDNNADEQVIRIR QIQDHKEDEDDDDIEYDVTLKKLEQHLLDTLTLRGVNGVERAFINEKSKVRVLEDGSLFT SKVDPLCKEWVLETSGSALGEVLAVPGVDATRTYSNQFIEVFEVFGIEAARTAVLRELTQ VLAFDGSYVNHRHLALLVDVMTVRGYLTPVTRHGINRADNGALMRCSFEETVEILLEAAA FGELDDCRGVSENLILGQMAPAGTGEFDIYLDQNMLNTVVSNNARFGVMGAIGAKDAIIS DGASTQYDTGSPMQDNAYIGTPDPESNFSPIRQAGAESPGGFTEYQPTGGFGGGFSPAAT SPAGYSPSSPFSANPTSPGYSPSSSYSPTSPGMAMTSPRFSMTSPGFSPASPSFAPTSPA YSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAI GGAARHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSPTSPGGPTSPGYSPTSPA FSPSSPRQ NT seq 5247 nt NT seq  +upstreamnt  +downstreamnt atgtcgaacgtctacttcccctattccaaggcgcctttgcgcaccatcaaggaaattcag tttggtctcttctcaccagaagagatcaaacggatgagtgtggtccatgtggagtatcca gagactatggatgaacaaaggcaacggccgcgaaccaaaggtctgaacgatcctcgcttg ggaaccatagatcggcaatggaactgcgagacttgtgaggaaggccagaaggaatgtccg ggacattttggacatattgagctggccactcctgtttttcatattggtttcttgacgaaa atcaagaagctacttgagacggtctgccacaattgtggcaagatcaaagccaacacgtct gattccaagttccttgaagccctacgcatgagagacccgaagagacgtttcgaccacatc tggcgactatcgaaagatatcacgatatgtgaagccgaccctcctccggatgaggacgag ccgtatgcgaaagagagctccaaaccaacgagaatgcacggtggttgcggaaatgcccag ccgactattcgcaaagagggaatcaccttggtggggacctggaaacctagcaagagcatg atggacgagatggatatgcagcagccagagaagaagacaatcaccccccagatggctctg aacatcttccgtaacatctctcacgaggatgttcgtataatggggctgagcaatgactat gctcgccctgagtggatggttcttactgtcttgccagtgccgccgccccctgtccgtcca agtgtgcttgtgggtggtagcactagtggccagcgcggtgaggatgatctgacatacaag ctggctgaaattgttcgggcaaaccagaatgtccagcgttgcgaacaggaaggcgcccca gagcacgtggtacgagagttcgagtctctattacagtatcatgtcgccacatacatggac aatgatattgctggccaaccaaaggctatgcagaagtcaaacagaccagtgaaagctatt cgcagccgtttgaagggtaaagaaggtcgcttgcgacagaacttgatgggtaagcgtgtg gatttctcagctcgtactgtcattacaggtgatcccaatctgtctcttgacgaggttggt gtgccaaaaagtatcgcaaggactttgacataccccgaagttgttacgccatacaacatc gacaaattgcagcagctcgtctcgaatggtcctaacgagcaccctggagcaaggtatatc gtgagagataacggtgaacgtattgacctgcgccatgctaaacgagccggaggccaacaa ctactgtacggatggaaggtagagcgtcatgtcatggatggtgatgtgattcttttcaat cgacagccctcacttcataaggaatctatgatgggtcaccgtgttcgcgttatgccgtac tctacattcaggctcaacttgtctgtgactactccttacaacgccgattttgacggcgat gagatgaacttgcatgttcctcaaagtgaggagtctcgcgcagaactactccagcttgct ctggttccaatgaacattgtatcccctcagcgaaacggacctcttatgggtatcgtacag gatactctctgcggtatctacaagatttgtcggcgtgatacattcttgacaaaggaacaa gttatgaaccttatgatgtgggttcctgactgggacggcgtgattcccccaccagcaatc ttgaagcctaggcccagatggactggcaagcaaattattagcatggcgcttccttcgggg ctcaatcttctccgtgtggataaggacaactcagcgctctctgagaagtttgcccctctg aatgatggtggtcttctcattcatggtggacagttgatgtatggaatgttttccaagaag actgttggtgccagtggtggtggtgtcatccacaccattttcaatgaatatgggccaggt actgctgtggcctttttcaatggtgcacaggctattgttaactactggctacttcacaat ggcttcagtattggtattggtgacactattccagacgcggttactatacaaagaattgag aactgcgtccgggaacgaaagaaggaggttgaaactatcactgcaagtgctacggacaat accctggagccgttgccgggtatgaatgtgcgagaaacctttgaaagtaaggtttcacgt gcacttaacaatgctcgtgacgaagctggtagtgaaactgagaagagcttaaaggatctg aacaacgccatccagatggctcgttctggatcaaagggatcaaccatcaacatatcccag atgactgctgtcgtgggtcaacaatccgtcgagggtaaacgtatcccgttcggtttcaag tatcgtactttgccccatttcacaaaggatgactactctccagaatcccgtggttttgtg gagaactcctacttgcgtggcttgacacccactgagtttttcttccacgccatggctggt cgtgagggtcttattgatacagctgtcaagaccgcagaaaccggttatatccagcgaaag ctggttaaggctttggaagaagtaatggttaagtacgatggcactgttcgtaactctttg ggagatatcatacagtttatctacggagaagacggccttgacggtgctcatattgagaac caacgagtcgacatcattaaatgctctgacgaccagtttagagatcgtttccgtatcgat cttatggaccctgagcgcagcttaggtccagaggtcttagaacaggccaatgaaattgca ggcgacgtcgaagtccagagatatctggatgaagaatgggagcaacttctcaaagcccgt gcttttctccgtactgtggctaaggaagacgaggagatgatgcagcttccaatcaacgtc cagcgaattctcgagatggctagaactacgtttagaatccgcgagggaaccattagcgat ttacacccagccgaagttatccctcaggtacaagcattgcttgatcggctgcttatcgtg cgcggtgatgacccgatctcgcaggaagcccaggagaatgccacactgttgttcaaggcc caacttcggagtcgtctggcgttccgaagactggtcaccgagtattccatgaataaactt gcgttccagcatgttattggagccatcgaaagtaggttcgctaaagctaatgctcctgct ggtgagatggttggtgttctcgctgcccagtctattggagagccagctacgcagatgact ctaaacactttccattttgctggtgtctcgtccaagaacgttacacttggtgtccctcgt ctgaaggaaattctcaacgttgcaaccaatatcaagacgccttctatgactgtttaccag gagcccggtaggacccacgataaggagggtgcaaagcaattgcgaagcgttgttgaacat actagcttgcggtccgttactgaggccaccgagatctattacgatcccgatatccagtct acagtcattgaaaacgatcgggacatggttgagtcctacttcattattcctgaagacgtg acggacgattcatctcgccagtccaagtggttacttcgtatcattctcagtcggccgaag cttcttgacaagggtcttacagtgcaggatgttgctaccagaattaaacaagcgtatccc aaggatatcgctgttatctttagcgacaacaacgctgatgagcaggttattcggatccga cagatccaggaccacaaggaggatgaagacgatgatgatattgaatacgacgtcacactc aagaaacttgaacaacatcttttggacaccttaacacttcgcggtgttaacggtgtcgaa cgagcgttcatcaacgagaagagcaaagtccgagtccttgaggacggttcattgttcacc agcaaggttgatcccctttgcaaggaatgggttcttgaaacaagtggttctgcccttggc gaggtgttggcggttcctggagttgatgccacccgcacatattccaaccagtttatcgag gtgttcgaggtctttggtatcgaagccgcccgtacggctgttcttcgcgaactgacgcag gtgcttgccttcgatggttcttacgtcaatcaccgtcatttggctctcctggtcgatgtc atgactgtgcgtggttacctcacgccagtcacccggcatggtatcaaccgtgctgacaac ggtgctcttatgcgttgttctttcgaagagacagtggagatcttgttagaggccgcagcc ttcggagaattggacgactgccgtggcgtgtctgagaacctgattctgggacagatggca cctgccggtactggagagtttgacatttacctcgaccagaatatgctcaacactgtcgtt tcgaataatgctcgctttggtgtgatgggagctatcggcgccaaggatgcgattatttct gacggtgcctccactcaatatgacactggttcacccatgcaggataacgcttatattggc acacctgatcccgaatcgaacttctctcctatccgccaggccggtgctgaatctccgggt ggctttactgagtaccagccgaccggtggttttggaggcgggtttagcccagcggccacg agtccagccggctattctcccagtagcccattcagtgctaatccaacatctcctggctat tccccgtcctcgagctactcaccaacgtctcctggtatggcaatgaccagccctcgtttc tctatgacgtctccgggtttctctcctgccagcccgtcattcgcaccgacatcacctgct tactcgccaacttcaccggcgtatggccaagcttcgccgacctcaccgtcgtactctcct acctcgcccggattttcgccgacatcgccaaactacagtcctacatcgccaagcttcagc ccagcgtcgcctgcgttcagtccaacgtcgccaagctacagcccaaccagccccgctatt ggtggtgctgctcggcacttgtctcctacttcaccaacctctccaaagtatacacccaca tctcctgggtggtctcctacgagccctcagacatactctcctacctctcctaattttgcc ggctcgccgacctctcccggaggacctacatccccaggttatagtccgacgtcgccggcg ttcagcccttcgtcccctcgccagtga

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