Aspergillus flavus: AFLA_002021
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Entry
AFLA_002021 CDS
T01090
Name
(GenBank) hypothetical protein
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
afv
Aspergillus flavus
Pathway
afv03018
RNA degradation
afv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AFLA_002021
09123 Folding, sorting and degradation
03018 RNA degradation
AFLA_002021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afv03019
]
AFLA_002021
03041 Spliceosome [BR:
afv03041
]
AFLA_002021
Messenger RNA biogenesis [BR:
afv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AFLA_002021
mRNA degradation factors
5'-3' decay
Lsm complex
AFLA_002021
Spliceosome [BR:
afv03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
AFLA_002021
Complex C
U2 snRNP components
AFLA_002021
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
LRR_9
Hfq
SM-ATX
Motif
Other DBs
NCBI-ProteinID:
KAF7625147
LinkDB
All DBs
AA seq
98 aa
AA seq
DB search
MLFFSFFKTLTNQTVIIELKNDIRIRGTLKSVDQYLNIKLDDVDVLDLDKYPHLSSVKNM
FIRGSVVRYVVLPRSEVDVGLLEDATRREAANQAGKAR
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgctcttcttcagtttcttcaagaccctcacaaaccagaccgtgatcatcgagctcaaa
aatgacattcgcatccgcggaacactgaaatccgtcgaccaatacctcaacatcaagctc
gacgatgtcgacgtcctggacctggacaagtaccctcacctgtcatccgtgaagaacatg
ttcatccgtggtagcgtggttcgctacgttgttttaccccggtcggaagtggatgtcggg
ttgctggaggatgccacaagacgagaggcagccaaccaagccggaaaagcccggtga
DBGET
integrated database retrieval system