KEGG   Aspergillus flavus: AFLA_002021
Entry
AFLA_002021       CDS       T01090                                 
Name
(GenBank) hypothetical protein
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
afv  Aspergillus flavus
Pathway
afv03018  RNA degradation
afv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:afv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AFLA_002021
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AFLA_002021
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afv03019]
    AFLA_002021
   03041 Spliceosome [BR:afv03041]
    AFLA_002021
Messenger RNA biogenesis [BR:afv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     AFLA_002021
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     AFLA_002021
Spliceosome [BR:afv03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    AFLA_002021
 Complex C
  U2 snRNP components
    AFLA_002021
SSDB
Motif
Pfam: LSM LRR_9 Hfq SM-ATX
Other DBs
NCBI-ProteinID: KAF7625147
LinkDB
AA seq 98 aa
MLFFSFFKTLTNQTVIIELKNDIRIRGTLKSVDQYLNIKLDDVDVLDLDKYPHLSSVKNM
FIRGSVVRYVVLPRSEVDVGLLEDATRREAANQAGKAR
NT seq 297 nt   +upstreamnt  +downstreamnt
atgctcttcttcagtttcttcaagaccctcacaaaccagaccgtgatcatcgagctcaaa
aatgacattcgcatccgcggaacactgaaatccgtcgaccaatacctcaacatcaagctc
gacgatgtcgacgtcctggacctggacaagtaccctcacctgtcatccgtgaagaacatg
ttcatccgtggtagcgtggttcgctacgttgttttaccccggtcggaagtggatgtcggg
ttgctggaggatgccacaagacgagaggcagccaaccaagccggaaaagcccggtga

DBGET integrated database retrieval system