Aspergillus flavus: AFLA_002225
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Entry
AFLA_002225 CDS
T01090
Name
(GenBank) hypothetical protein
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
afv
Aspergillus flavus
Pathway
afv03008
Ribosome biogenesis in eukaryotes
afv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AFLA_002225
09123 Folding, sorting and degradation
03018 RNA degradation
AFLA_002225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afv03021
]
AFLA_002225
03019 Messenger RNA biogenesis [BR:
afv03019
]
AFLA_002225
03009 Ribosome biogenesis [BR:
afv03009
]
AFLA_002225
03016 Transfer RNA biogenesis [BR:
afv03016
]
AFLA_002225
Transcription machinery [BR:
afv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
AFLA_002225
Messenger RNA biogenesis [BR:
afv03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
AFLA_002225
Ribosome biogenesis [BR:
afv03009
]
Eukaryotic type
Pre-60S particles
RNases
AFLA_002225
Transfer RNA biogenesis [BR:
afv03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
AFLA_002225
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC
Cin1_N
Motif
Other DBs
NCBI-ProteinID:
KAF7625357
LinkDB
All DBs
AA seq
1035 aa
AA seq
DB search
MGVPALFRWLSNKYPKIISPVIEEQPYEVNGEQIPVDTTRPNPNGEELDNLYLDMNGIVH
PCTHPEGKPPPANEQEMMLEIFNYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARRFR
SAQEAKEADEKKEEFRKQFLKKSKGDQEIHEEVIQKTWDSNVITPGTPFMDILAASLRYW
IAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFVRSQRAAPEHDPNTRHVIYGLDADLI
MLGLATHEPHFRVLREDVFFQESKARTCHLCGQAGHKAEECRGQAKEKNGQFDEKGKGTS
LKPFIWLNVSILREYLAVELYVPHQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLDIRE
NGIDTLIAIWRDNIPVMGGYLTKDGHVEFKKAQLILQGLAKQEDAIFRRRRQVEEKKLAN
EKRRKEEAQARDRARKRRRSSPNYEPSEPPASNRARGGGGDSAPPNDVELIIPGRGELSR
ENRELTHSMVVNRGAVYRANMANKSAAAILKSKLMKGSQEGDDTAESTPMPDADGASDSK
IEPTSPSVLGKRKAEEPEGETDTPADNTDSTPKPSKDDEMPPDTVRLWEEGYADRYYEQK
FGVDPQDKEFRHKVARAYAEGLAWVLLYYFQGCPSWNWYYPYHYAPFAADFVDIGDMELS
FEKGTPFKPFEQLMGVLPASSNHAIPEVFHDLMQDPESEIIDFYPEDFAVDLNGKKFAWQ
GVILLPFIDEKRLLAAMEKKYPLLSDDERHRNTVGREVLLLSDGHPLYQDLVANFYSKKQ
GAPKYTLNMRVSEGLAGRVERNETYIPHSSLVSSLEEYGMPTLEDDRSLTVNYEIPKSNH
IHKSMLLRGVKFPPPALDNADIQATRSKAQHSGRSFGGAPFRGGHGNRGGRINYASDRPN
PFAAHLDPNFMPPSNAGAQGMPSGWAPPVPGSANFSRGPPPPPRGNHRNHYGSGHAQQQG
YQQTNYGRNDYYGRGQQGHQHQGSYGNQSGQYSGRQSGYGGAEYRGGGYQRGGYQGQGQG
RDYYNSRNQGGYGRY
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttcccgcactattccgttggctctccaacaaatacccgaaaatcatttcgccc
gttattgaggagcagccctacgaggtcaatggagaacagatcccggtcgacaccacgcgt
ccgaatcccaatggggaggagttggataatctatacctggacatgaatggtattgtccat
ccatgtactcacccagagggaaagcctccaccggcaaacgagcaggagatgatgttggag
atctttaactacaccgaccgagttgtgaacatggtccgcccgaggaaactcctgatgatc
gcagtcgatggtgttgcgccgcgagcaaagatgaaccaacagcgtgcacgtcgtttccgc
tctgcgcaagaggctaaggaggcggatgagaagaaggaagaattccggaaacagttcctc
aagaagagcaaaggggatcaggagattcacgaagaagttatacagaagacgtgggatagc
aacgtcatcacccccggaactcctttcatggacattctcgctgcatccctgcgctactgg
attgcttataagcttaacacagatccagcttgggagaagctcaaaatcatcatttccgac
gcgacagtcccgggagaaggagaacacaaaatcatggagtttgtccggtcgcaacgagct
gcgccagagcatgatccgaacactcgtcacgttatttatggtttggatgccgatttaatt
atgctgggtctcgctactcacgagcctcatttcagagtgcttcgagaggatgtgttcttt
caggagtctaaagctcgaacatgccacctatgcggccaggcaggccataaggctgaagaa
tgcagaggccaggcaaaggagaagaacggacaatttgatgaaaagggcaaaggcacatca
ctgaaaccatttatttggctcaatgtttctatcctccgagaatatcttgccgtcgagctg
tacgttccgcatcaaccgttccctttcgacctggaacgagccttggatgattgggtcttc
atgtgctttttcgtaggtaatgatttcctgccgcacttgccctctttagacatccgagag
aacggcatcgacactttgatagcaatatggcgagacaatatccctgttatgggaggttac
ttgactaaagacggccatgttgagttcaaaaaagctcaacttattcttcaagggcttgca
aagcaagaagatgctattttccgccgccgcaggcaagtggaagaaaaaaagctcgcgaac
gagaagaggcgcaaggaagaggcacaggcccgagaccgtgccaggaaacgacgaaggagc
tcccctaattatgaaccctctgagcctcccgcaagcaaccgagcccgcggcggcggcggc
gactcagcgccgcctaatgacgtggagttaatcatccctggtcgaggagaactatcacga
gaaaaccgagagctgactcacagcatggtagtcaatcgtggggctgtctatcgggccaat
atggctaacaagagtgctgcggctattttgaagagcaaacttatgaaaggttcacaggag
ggtgacgacactgcagagtccactccgatgccagacgcagacggagcttcagacagtaaa
atagaaccgacatcaccatccgttcttggcaaaagaaaggcagaagagccagagggcgag
acagacacacccgccgacaacacggactctacccctaaaccttccaaggatgatgagatg
cctcctgatactgtccgcctctgggaagagggttacgctgatcgttattacgagcaaaaa
tttggcgtggatcctcaggacaaagagttccgccataaggtcgcgcgagcatatgctgaa
ggcctagcgtgggttcttttgtattatttccaagggtgcccatcatggaattggtactat
ccttatcattacgcgccctttgcggctgactttgtggatattggtgatatggagctatct
tttgagaaggggacgcccttcaagccattcgaacagctcatgggagtccttccagcttcg
tcaaaccacgccattcccgaagtgttccacgatctcatgcaggaccccgagagcgaaatt
atcgatttttaccctgaagattttgcagtggatttgaacggcaaaaagttcgcttggcag
ggagttattctgctaccgttcattgatgagaagagacttctggccgccatggaaaagaaa
taccctttgctctccgatgatgagaggcatcgcaatactgttggtcgggaggtcttgctg
ctatcagacggccatcctctataccaggacttggttgccaatttctactcgaagaagcag
ggcgcccccaaatacacgttgaatatgcgagtaagtgaaggtttagcaggtagagtcgag
cgcaacgagacgtatattccacatagttcgttggtgtcctcgctcgaagaatacggcatg
cccactttggaggatgatcggtccttgaccgtcaactatgagatccccaaatcaaatcac
atccacaaatctatgttgctgcgaggcgtcaaatttcctcccccagcactagacaatgcc
gacattcaggctaccagatctaaggctcaacactcgggccgctcgtttggcggtgcaccg
tttcgcggtggccatgggaacaggggcggtcgaatcaactacgcaagcgaccgaccaaat
ccttttgcagcgcatctcgatcccaacttcatgcccccatcaaatgcaggcgctcagggg
atgccttctggctgggctcccccagtaccgggatctgcgaacttctcccggggtccccca
cctcccccccgcggaaaccaccggaatcattacggctcaggacatgctcagcaacaaggt
tatcagcagacgaactatgggcgaaacgactactatggccgcggtcagcagggacatcag
catcagggatcctacggcaaccaatccggtcaatatagcggacggcagtctggctacgga
ggggctgaatatcgaggcggaggctatcaacgcggaggataccaaggccaaggtcaaggc
cgtgactactacaattccaggaaccagggtggatatggtcgctattaa
DBGET
integrated database retrieval system
