Aspergillus flavus: AFLA_002892
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Entry
AFLA_002892 CDS
T01090
Name
(GenBank) hypothetical protein
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
afv
Aspergillus flavus
Pathway
afv03018
RNA degradation
afv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AFLA_002892
09123 Folding, sorting and degradation
03018 RNA degradation
AFLA_002892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afv03019
]
AFLA_002892
03041 Spliceosome [BR:
afv03041
]
AFLA_002892
Messenger RNA biogenesis [BR:
afv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AFLA_002892
mRNA degradation factors
5'-3' decay
Lsm complex
AFLA_002892
Spliceosome [BR:
afv03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
AFLA_002892
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
Motif
Other DBs
NCBI-ProteinID:
KAF7627512
LinkDB
All DBs
AA seq
83 aa
AA seq
DB search
MASQLLPLELIDKCVGSRIWVIMKNDKEFAGTLLGFDDYVNMVLEDVTEFDYSGAQIKLP
KILLNGNNVCMLIPGGEGPVGSS
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcaactcctccccctcgagctgatcgacaagtgtgtcggttctagaatttgg
gtcatcatgaagaatgacaaagaattcgctggtactttgctcggttttgatgactacgtc
aacatggtcctggaagacgtgacagaattcgattactccggtgctcagattaagctcccc
aagatcttgctaaatggaaacaacgtctgcatgttgatccctggtggcgaaggaccggtc
ggtagctcttag
DBGET
integrated database retrieval system