Aspergillus flavus: AFLA_005627
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Entry
AFLA_005627 CDS
T01090
Name
(GenBank) hypothetical protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
afv
Aspergillus flavus
Pathway
afv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AFLA_005627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afv03041
]
AFLA_005627
03009 Ribosome biogenesis [BR:
afv03009
]
AFLA_005627
Enzymes [BR:
afv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AFLA_005627
Spliceosome [BR:
afv03041
]
Complex A
U2 snRNP components
U2 related factors
AFLA_005627
Complex B
AFLA_005627
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
AFLA_005627
Ribosome biogenesis [BR:
afv03009
]
Eukaryotic type
90S particles
Helicases
AFLA_005627
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
SRP54
AAA_19
Flavi_DEAD
T2SSE
nSTAND3
ABC_tran
AAA_23
Motif
Other DBs
NCBI-ProteinID:
KAF7620318
LinkDB
All DBs
AA seq
767 aa
AA seq
DB search
MVDRRSDAEDGSRAKRQKMDKTGTDPKDNPYLAHMYADASPNGNEWAADKDSPFAKVKRH
QSTAAQAQKIEDGDINPFNGQPYSSKYFSILKTRRDLPVHAQRDEFLQLYQKSQILVFVG
ETGSGKTTQIPQFVLFDDQPQSQRKMVACTQPRRVAAMSVAQRVAAELDVKLGEEVGYSI
RFEDMTSPKTCLKYMTDGMLLREAMNDHNLNRYSTIILDEAHERTMATDVLMGLLKEVVQ
RRPDLKIIIMSATLDAQKFQRYFNDAPLLAVPGRTHPVEIFYTPEPEQDYVEAAIRTVLQ
IHATEADGDILLFLTGEEEIEDAARKISLEADEMVREVDAGPLKVYTLYGSLPPHMQQRI
FDPAPPPRRPGGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVS
PISKASAQQRAGRAGRTRPGKCFRLYTEGAFKKELIDQTYPEILRSNLSSTVLELKKLGI
DDLVHFDLMDPPAPETLMRALEELNYLACLDDDGNLTQLGRLASEFPLDPAVAVMLISSP
EFYCSNEILSITALLSVPQVFVRPASQRKRADEMKNLFAHPDGDHLTLLNVYHAFKGQDA
QENPKQWCHDHFLSLRSLQSADNVRMQLLRIMEREELEMVSTPFEDKKYYENIRRALCAG
FFMQVAKKEAQGKSKYTTIKDNQNVLLHPSTVLSYDADWVVYNEFVLTTKNYIRTVTAVK
PEWLIDIAPTYYDITSFPKGEIRSALLRAAERLSRKEKMRSDSSRKR
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggttgatcgccgatctgacgccgaagacggttcgcgtgctaagcgtcaaaagatggat
aaaactggcacggatcccaaggataatccgtacctggctcatatgtatgcggacgcttcc
ccgaatggcaacgaatgggctgcagataaggattcgccatttgccaaagtgaagagacat
cagtcgactgccgctcaggcacagaagatcgaagatggggacatcaaccctttcaacggc
cagccatactccagcaagtatttctcgattttaaaaactcggcgcgatcttccggttcat
gcgcagagagatgagttccttcaactctatcagaagtcccagatcctagtctttgtcggc
gagactggttccggtaaaactacccagatccctcaattcgtcctgttcgatgatcagccg
caaagccagcgcaagatggtcgcttgtacccagcctcgacgtgtggccgctatgtcagtc
gcgcaacgtgtggcagctgagttggatgtcaaacttggagaggaagtgggttacagcatc
cgttttgaagatatgacgagccccaagacatgtctcaagtacatgacggatggtatgctg
ttgagagaggccatgaatgatcacaaccttaaccgttacagtactattattctagacgag
gcccacgaaaggaccatggctactgatgttctcatgggtcttctcaaagaagtcgtacaa
cgtcgaccagatttgaagatcattatcatgtctgccaccttggatgcccaaaagttccag
cgctacttcaacgatgctccccttcttgcggttcccggtcgtactcacccagtcgagatc
ttctatactcctgagcctgagcaggactatgtggaggcagccattcgcactgtcttgcaa
attcatgctacagaggctgatggtgatatacttctgttcctgactggtgaagaagagatt
gaagatgctgcgcgcaaaatctcactagaggcagacgagatggtgagagaagtcgatgct
ggccccttgaaagtctatacactgtacggtagtcttcctccgcatatgcagcaacgcatc
tttgatccggctccgccaccccgtcgtcctggaggtcgtcctggtagaaaggtcattgtt
tccaccaacattgccgaaacctcgctcacgatcgatggtatcgtttacgtcgtggacccc
ggcttctcgaaacagaagatctacaaccctcgcattcgtgtcgagtctctcctagtatcg
cctatctctaaagcctctgcacagcaaagagccggtcgtgcaggtcgtacgcgtcccgga
aagtgcttccgtctttataccgagggtgccttcaagaaggaactgattgaccagacgtat
ccggaaattttacggtccaacctttcatccactgtgttagagttgaagaagcttggaatt
gatgaccttgttcacttcgatttgatggatcccccggctccggaaacacttatgagagct
cttgaagagcttaattacttggcttgtcttgatgatgatggcaacctaacccaacttggg
cgtcttgcctcggagtttcctcttgatcctgcggttgcggtcatgctgatcagctcgcct
gaattctactgttcaaatgaaatcctctctattacggctttgctttcggttcctcaggtg
ttcgtgagacccgcatctcaacgaaagcgggcggatgagatgaagaacctctttgcccac
cccgacggtgaccacctcactcttcttaacgtataccatgctttcaagggccaagatgca
caagagaaccccaagcagtggtgccatgaccatttcctgtccctccgatccctccagtcg
gcagataatgtgcgcatgcagctcctgcggatcatggagcgtgaggagctggaaatggtt
tcgacgccatttgaggacaagaagtactacgaaaatatccgacgtgctctctgtgctgga
ttcttcatgcaggttgcgaagaaggaagctcagggcaagagcaaatacacgacgattaag
gacaaccagaacgtcctcttgcacccgtcgactgttctaagctatgacgctgattgggtt
gtgtacaatgaattcgtgctcacgaccaagaactacatcagaaccgtcacagcagtcaag
cctgagtggctcattgatattgcgcctacctattatgacatcacgagcttccctaagggc
gaaattcgctctgcattgcttcgtgccgcagaaaggctgtctcgtaaagagaaaatgcgt
agcgattccagtaggaagcgttaa
DBGET
integrated database retrieval system
