KEGG   Aspergillus flavus: AFLA_010940
Entry
AFLA_010940       CDS       T01090                                 
Name
(GenBank) hypothetical protein
  KO
K12880  THO complex subunit 3
Organism
afv  Aspergillus flavus
Pathway
afv03013  Nucleocytoplasmic transport
afv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:afv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AFLA_010940
  09122 Translation
   03013 Nucleocytoplasmic transport
    AFLA_010940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afv03019]
    AFLA_010940
   03041 Spliceosome [BR:afv03041]
    AFLA_010940
Messenger RNA biogenesis [BR:afv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     AFLA_010940
Spliceosome [BR:afv03041]
 Complex C
  Other components
   EJC/TREX
    AFLA_010940
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    AFLA_010940
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML_2 ANAPC4_WD40 Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_WDR75_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_Aladin Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd WDR90_beta-prop_4th Cytochrom_D1 Beta-prop_WDR19_1st Beta-prop_EIPR1 Tricorn_2nd WD40_MABP1-WDR62_1st Beta-prop_SCAP DSE1_N Beta-prop_HPS5 Beta-prop_EML Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_NOL10_N eIF2A Beta-prop_TEP1_C Beta-prop_ACSF4 Beta-prop_Nup120_160 Beta-prop_WDR36-Utp21_1st WD40_RFWD3 TP_0598_N CFAP251_N Beta-prop_WDR41 Beta-prop_Vps41 Beta-prop_DCAF12 ASA1 PALB2_WD40 PAC11 Beta-prop_SPT8 Beta-prop_NUP159_NUP214
Other DBs
NCBI-ProteinID: KAF7630314
LinkDB
AA seq 375 aa
MAPPRRNLLPKERFAFSFGSLKTQSYHDPIARTPGSHTIRTIAWNPTGQLIATGSADRTL
RIWNPERAQVKYSTDLRGHTAGIEKVLFNPVRDSELASCSSDGTVRFWDVRSKTCVSRLD
VGGEAFTLSWSADGSTMVVGRKDDTLIPVSIESPSTPTVLENGVINVPSTQSQKPIAGPT
TYKVLDSHPQPIQTNATTFSHHISTPTSPDLHLFATTGEGTVKILSYPSFDVLHTLNAHT
SACLSIALAPTGRYLAVGGSDALISLWDTSDWICRRTVSSNNGGAVRGVSWSFDGRFICG
ACDEVGCGGNGIEIFHAETGESVYTVPTGGGMNSGIPAVAWHPSRYWLAYSTTADGPGGG
GASGLKIVGAAGGSL
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggcacctccccgccgcaatctacttcccaaagagcgattcgcattctcatttgggagc
ctcaagactcagagctatcatgaccctattgcgcgaacgcccggatctcatacaatccga
acgatagcatggaaccctaccggccagcttatcgctacaggctcagcggaccgtaccctt
cgaatctggaaccctgagcgcgcgcaagtcaaatactcgactgacctccgcggtcacacc
gcggggatcgagaaagtcttatttaacccagttcgagactcggagctagccagctgttct
tctgatggtaccgtgcgcttctgggatgttcgctcgaagacttgtgtgagccgtctagat
gtcggcggcgaagcattcaccttgtcttggtcggctgatgggagtacaatggtggttgga
aggaaggatgatactctgataccagtctccattgaatcaccttctaccccaactgtgctc
gaaaacggagtaataaatgtcccatccacgcagtcccagaaaccgatcgcaggcccaacc
acctacaaagtcctagattcccatccacagcccatccaaacaaacgcaacaaccttttct
catcacatctccacgccaacttcgcccgatcttcacctcttcgcaaccaccggcgaaggc
acagtcaaaatattatcctacccatccttcgacgtcctccacacccttaatgctcacaca
tccgcctgcctttccattgccctcgcacctactggacgctatctcgccgtcggcggcagc
gacgcccttatctctctctgggatacatcggattggatttgtcgacgcaccgtgtctagt
aataatggtggggccgtccgcggggtgagctggagctttgacggaagatttatttgcggt
gcttgtgacgaagtaggctgcggcggtaatggaattgagatcttccatgctgaaacaggc
gaaagcgtttatactgttcctactggtggcgggatgaattcgggcattcctgccgtcgca
tggcatccctcgcgttattggcttgcgtactctactacagcagacggtcctggaggtggc
ggagccagtggccttaagattgtgggagctgcgggtgggagtctctga

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