Anaeromyxobacter sp. Fw109-5: Anae109_0505
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Entry
Anae109_0505 CDS
T00559
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
afw
Anaeromyxobacter sp. Fw109-5
Pathway
afw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
afw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Anae109_0505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afw03400
]
Anae109_0505
Enzymes [BR:
afw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Anae109_0505
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Anae109_0505
DNA repair and recombination proteins [BR:
afw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Anae109_0505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
zf_CopZ
Zn_ribbon_TFIIB
Ribosomal_S13
Zn_ribbon_SprT
DZR
DNA_ligase_ZBD
Cys_rich_KTR
RNHCP
Zn_Ribbon_TF
DUF7577
Motif
Other DBs
NCBI-ProteinID:
ABS24719
UniProt:
A7H7M3
LinkDB
All DBs
Position
complement(571728..572669)
Genome browser
AA seq
313 aa
AA seq
DB search
MPELPDIEVYVEAIAARVRARPLLRVRLGSPFVLRSVDPPLGEAAGKRVEDVRRVGKRIV
LALEGDLFLALHLMIAGRLHWREAGAKLPGRVGLAALDFEDGTLVLTEAGTKRRAAIHLV
RGAAALAALDRGGIEPLDADLAAFRAALTRENHTLKRALTDPSLLSGIGNAYSDEILHRA
RLSPVKLTSRLTDEELARLHAATRAVLTEWTDRLRREAAGGFPEGVTAFREEMAVHGRHR
QPCPVCGTAVQRIVRAENEVNYCPRCQTEGQILSDRSLARLLKEDWPRTIEELERNPALG
APRPPPAPRRRSR
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtgccagagctcccggacatcgaggtctacgtcgaggccatcgccgcccgcgtccgggcg
cggccgctcctgcgcgtgcggctcgggagcccgttcgtgctccgctcggtggacccgccg
ctcggcgaggccgccgggaagcgcgtcgaggacgtccggcgcgtgggcaagcggatcgtc
ctcgccctcgagggcgacctcttcctcgcgctgcacctgatgatcgcgggccgcctccac
tggcgcgaggccggcgcgaagctgcccggccgcgtgggcctcgcggcgctcgacttcgag
gacggcacgctcgtgctcaccgaggcgggcacgaagcggcgcgccgcgatccacctcgtc
cgcggcgccgcggcgctcgccgccctcgaccgcggcgggatcgagccgctcgacgcggac
ctcgccgcgttccgggccgcgctcacccgcgagaaccacaccctcaagcgcgccctcaca
gatccctccctgctgtccggcatcggcaacgcctactcggacgagatcctgcaccgggcc
cggctctcccccgtcaagctcacctcgcgcctgaccgacgaggagctggcgcggctccac
gcggcgacccgcgcggtgctcacggagtggacggaccggctccggcgcgaggcggcgggc
ggcttccccgagggcgtcaccgccttccgcgaggagatggcggtccacggcaggcaccgc
cagccgtgccccgtgtgcggcacggcggtgcagcggatcgtgcgcgccgagaacgaggtc
aactactgcccgcgctgccagaccgaggggcagatcctgtcggaccgatcgctggcgcgg
ctcctcaaggaggactggccgcggaccatcgaggagctcgagcgcaacccggcgctgggc
gcgccacgccccccgccggcgccgcggaggaggtcgcgttga
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