Anaeromyxobacter sp. Fw109-5: Anae109_0762
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Entry
Anae109_0762 CDS
T00559
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
afw
Anaeromyxobacter sp. Fw109-5
Pathway
afw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
afw00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Anae109_0762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afw03021
]
Anae109_0762
Transcription machinery [BR:
afw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Anae109_0762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_ner
Sigma70_r4
Sigma70_r1_2
DUF3563
Motif
Other DBs
NCBI-ProteinID:
ABS24974
UniProt:
A7H8C8
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All DBs
Position
863123..865582
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AA seq
819 aa
AA seq
DB search
MKRKLRSILGKFAGLARPRPVTKAPHRAEQSKEPRHMTTKAAKKPLKKPAAKPKAKPAPR
EKERLAKAAKAKAAPKHAGKVARSPAKVEKAAHAQKPQKAAPRKPEKAEKVVEKAARAPE
KAEKAEKVSKKKVEAVAPVAVVPPKGKGPKLRKAAKPFDGEEADAEEGEEVEAAADDDEL
DEDLPQDDMSDITERSEVKALMQRGREKGFLTYDEVNDALPSDIGSDQIDDVMSMFGEHD
IEVVDGAEKKMKLPDKPPEPEGKAEAEEEKDEDEDPGYGKSNDPVRMYLRKMGSVSLLTR
EGEVEIAKRIEEGEKEILAAVLSSSIAIREILELGERLRKGKIRVREIIKDAGDEQQAER
EEEEIEEESLEAEGAEEASAEAAGAEGPEGGAAEGAEPERPKIPKEEERKVEHVLKHIDL
IRKLEDDVVKVKETLTTKKVSEPKRKELRSEIKTIEGEMMEHLEAIQLNKKQIDRIVLRL
KGFIKRVEEAERELADCERATSVPVRELRRLLREAREDEGARKKLGKKLGCSAEEVEELD
RTVRSAYRKMLRVQEEAEVPVDELRRTYRTISDGEHKAERAKTELVEANLRLVVSIAKKY
TNRGLQFLDLIQEGNIGLMKAVDKFEYKRGYKFSTYATWWIRQAITRAIADQARTIRIPV
HMIETINKLIRTSRYLVQELGREPTPEEIAEKMELPLDKVRKVLKIAKEPISLETPIGEE
EDSHLGDFIEDKSLVSPSDAVINMNLAEQTRKVLATLTPREEKVLRMRFGIGEKSDHTLE
EVGQDFEVTRERIRQIEAKALRKLRHPSRSKRLKSFVEN
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcaagctgcggagcattctaggaaagttcgccgggctcgcccgtcccagaccc
gttacaaaggcgccacatcgtgcagagcagtcgaaggagccgaggcacatgaccacgaag
gccgcgaagaagccgctcaagaagcccgccgccaagccgaaggcgaagccggcgccgcgg
gagaaggagcggctcgcgaaggccgcgaaggcgaaggccgcgccgaagcacgcagggaag
gtcgcccgctcgcccgccaaggtggagaaggcggcgcacgcccagaagccgcagaaggct
gcgccccgcaagccggagaaggccgagaaggtggtcgagaaggccgcgcgggcgccggag
aaggcggagaaggcggagaaggtctcgaagaagaaggtcgaggccgtcgcgccggtcgcg
gtggtgccgccgaaggggaaggggccgaagctccgcaaggcggcgaagccgttcgacggc
gaggaggccgacgccgaggagggcgaggaggtcgaggccgccgcggacgacgacgagctc
gacgaggacctgccccaggacgacatgagcgacatcaccgagcggtccgaggtgaaggcg
ctcatgcagcggggccgcgagaagggcttcctcacctacgacgaggtgaacgacgccctc
ccctcagacatcggctcggaccagatcgacgacgtcatgtcgatgttcggcgagcacgac
atcgaggtggtcgacggcgcagagaagaagatgaagctcccggacaagccgccggagccc
gagggcaaggcggaggccgaggaggagaaggacgaggacgaggaccccggctacggcaag
tccaacgacccggtccgcatgtacctgcggaagatggggtcggtgtcgctcctcacgcgc
gagggcgaggtcgagatcgccaagcggatcgaggagggcgagaaggagatcctggcggcg
gtgctctcgtcgagcatcgcgatccgcgagatcctcgagctcggcgagcggctgcggaag
ggcaagatccgggtccgcgagatcatcaaggacgcgggcgacgagcagcaggcggagcgc
gaggaggaggagatcgaggaggagtcgctcgaggccgagggcgccgaggaggcctccgcg
gaggccgcgggcgccgagggccccgagggtggcgcggccgagggcgccgagcccgagcgc
ccgaagatccccaaggaggaggagcgcaaggtcgagcacgtgctgaagcacatcgacctc
atccgcaagctcgaggacgacgtcgtgaaggtgaaggagaccctcacgacgaagaaggtc
tcggagccgaagcgcaaggagctcaggagcgagatcaagaccatcgagggcgagatgatg
gagcacctcgaggccatccagctcaacaagaagcagatcgaccggatcgtcctgcgcctg
aagggcttcatcaagcgggtggaggaggcggagcgcgagctcgccgactgcgagcgggcg
acctccgtcccggtgcgcgagctgcggcggctcctgcgcgaggcgcgcgaggacgagggg
gcgcgcaagaagctcgggaagaagctcgggtgctcggcggaggaggtcgaggagctcgac
cggacggtgcgctcggcgtaccgcaagatgctgcgcgtccaggaggaggcggaggtcccg
gtggacgagctccgccgcacctaccgcaccatcagcgacggcgagcacaaggcggagcgc
gccaagaccgagctcgtcgaggcgaacctgcgcctcgtggtgtcgatcgcgaagaagtac
acgaaccgcggcctgcagttcctggatctcatccaggagggcaacatcggcctcatgaag
gcggtggacaagttcgagtacaagcgcggctacaagttctcgacctacgcgacgtggtgg
atccgccaggcgatcacgcgcgccatcgccgaccaggcgcgcacgatccgcatcccggtc
cacatgatcgagaccatcaacaagctcatccgcacgagccgctacctcgtgcaggagctc
ggccgggagccgacgccggaggagatcgcggagaagatggagctcccgctcgacaaggtc
cgcaaggtcctcaagatcgccaaggagcccatcagcctcgagacgcccatcggcgaggag
gaggacagccacctcggtgacttcatcgaggacaagtcgctcgtgtcgccgtccgacgcg
gtcatcaacatgaacctggccgagcagacgcggaaggtgctcgccacgctcacgccgcgc
gaggagaaggtcctccgcatgcgcttcggcatcggcgagaagagcgaccataccctcgag
gaggtcgggcaggacttcgaggtgacgcgcgagcgcatccggcagatcgaggcgaaggcg
ctcaggaagctgcgccatccgagccgctcgaagcggctcaagagcttcgtcgagaattag
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