Anaeromyxobacter sp. Fw109-5: Anae109_0900
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Entry
Anae109_0900 CDS
T00559
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
afw
Anaeromyxobacter sp. Fw109-5
Pathway
afw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Anae109_0900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afw03019
]
Anae109_0900
03400 DNA repair and recombination proteins [BR:
afw03400
]
Anae109_0900
Enzymes [BR:
afw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Anae109_0900
Messenger RNA biogenesis [BR:
afw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Anae109_0900
DNA repair and recombination proteins [BR:
afw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Anae109_0900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
HHH
DNA_pol3_theta
Motif
Other DBs
NCBI-ProteinID:
ABS25109
UniProt:
A7H8R3
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All DBs
Position
1027480..1029297
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AA seq
605 aa
AA seq
DB search
MARSPETLFSAADRRALEAEVEELAGAWDAFRARQERSPEVDAAPPEDAVVHRSCGARLD
ALRARWREAPELFLPPTVERLRALAEAIGRAPAPPPATASGARQLLREVFGHAAFRPGQE
EIVTAVLAGRDCLGVMPTGAGKSLTYQIPARILGGTTLVVSPLVALMKDQVDAMGRVGLR
AAFLNSTLSPEERRERVRALRRGELELLYAAPEGLEASVGSALEGVRLSLIAVDEAHCIS
HWGHDFRPAYRNLAGLKERFGARVLALTATATPEVTHDIAAQLGMERPLVVRGSFLRRNL
SLHAVKKGEGLRTRDALVRLVRARKGESGIVYALSRKSVEETAALLREHGVRAEAYHAGL
EPDVRARVQDAFQSGAIDVVAATVAFGMGIDKPDIRFVIHRDLPRSIESYYQEIGRAGRD
GKPSTCVLFYSWADVMSWERLLGDVEPELAEAQLRQTRAMYRLADGDGCRHERVVGHFGE
VVAPCGDACDRCSGDDVVASAPAVRVARSSRGGGRARRGGDGRGRGGPALDAEVDLELFE
ALRAWRGEIARARGVPAYVVFADATLAELALHRPVSRDELLEVKGIGPRKLDEYGEALVR
ILKGG
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcgctcacccgagaccctcttctcagctgcggaccgccgcgcgctcgaggccgag
gtcgaggagctcgccggcgcctgggacgccttccgggcccgccaggagcgctcgccggaa
gtcgacgcggcgccgccggaggacgccgtcgtccaccggagctgcggcgcccggctcgac
gcgctgcgcgcccgctggcgcgaggcgccggagctgttcctcccgccgaccgtggagcgg
ctgcgcgcgctcgcggaggcgatcgggcgggcgcccgctcctccgcccgcgaccgcgtcg
ggggcgcgccagctgctccgggaggtgttcgggcacgcggccttccgtccgggccaggag
gagatcgtgacggcggtcctcgccgggcgggactgcctcggcgtcatgccgaccggcgcg
ggcaagtcgctcacctaccagatcccggcgcggatcctgggcggcaccacgctcgtcgtg
tcgccgctcgtcgcgctgatgaaggaccaggtggacgcgatggggcgcgtcgggctgcgc
gcggccttcctcaactcgacgctctcgccggaggagcggcgggagcgggtgcgcgcgctg
cgccgcggcgagctcgagctgctctacgccgcgcccgaggggctcgaggcctccgtgggc
agcgcgctcgagggcgtgcggctgtcgctcatcgccgtggacgaggcgcactgcatcagc
cactgggggcacgacttccgccccgcctaccgcaacctggcggggctgaaggagcggttc
ggcgcgcgcgtgctcgcgctcaccgccaccgcgacgcccgaggtgacgcacgacatcgcg
gcgcagctcgggatggagcggccgctcgtcgtgcgcggctccttcctccgccggaacctg
tccctgcacgccgtgaagaagggcgagggcctgcgcacgcgcgacgcgctcgtgcggctc
gtccgcgcgcgcaagggcgagagcgggatcgtctacgccctctcgcggaagtcggtggag
gagaccgccgccctcctgcgcgagcacggcgtccgcgcggaggcctaccacgccgggctc
gagcccgacgtccgcgcgcgcgttcaggacgccttccagtccggcgcgatcgacgtggtc
gccgcgaccgtcgccttcgggatgggcatcgacaagcccgacatccgcttcgtcatccac
cgcgacctgccgcgctcgatcgagtcgtactaccaggagatcggccgcgccggccgcgac
gggaagcccagcacctgcgtgctcttctactcctgggcggacgtcatgagctgggagcgg
ctcctcggcgacgtcgagccggagctcgcggaggcgcagctgcgccagacgcgggcgatg
taccggctcgccgacggcgacggctgtcgccacgagcgcgtggtggggcacttcggcgag
gtggtggcgccgtgcggagacgcctgcgatcgctgctccggcgacgacgtcgtcgcgagc
gcgcccgcggtgcgggtggcgcgctcctcgcgcggcggagggcgggcccggcgcggcggg
gacggccgcgggcgcggcggccccgcgctggacgccgaggtggacctcgagctcttcgag
gcgctccgcgcctggcgcggcgagatcgcccgcgcccgcggcgtccccgcctacgtggtg
ttcgcggacgcgacgctcgcggagctcgcgctccacaggcccgtgtcgcgggacgagctg
ctcgaggtgaagggcatcggtccgcgcaagctcgacgagtacggggaggcgctcgtgagg
atcctgaagggcggatag
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