Anaeromyxobacter sp. Fw109-5: Anae109_1378
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Entry
Anae109_1378 CDS
T00559
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
afw
Anaeromyxobacter sp. Fw109-5
Brite
KEGG Orthology (KO) [BR:
afw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afw03016
]
Anae109_1378
Enzymes [BR:
afw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Anae109_1378
Transfer RNA biogenesis [BR:
afw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Anae109_1378
Prokaryotic type
Anae109_1378
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
AvrRpt-cleavage
Motif
Other DBs
NCBI-ProteinID:
ABS25585
UniProt:
A7HA39
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All DBs
Position
complement(1557240..1558607)
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AA seq
455 aa
AA seq
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MKLKQRPEDFQVTESWRFEEDPRGAHFVYLMDKQKLSTFEAVERICAGFKIPRAAVSYCG
LKDKQGRTTQLIAIQGREIELQDPDLRLKPLGRAAEPLSAANTTSNRFAVTVRDLGEDDV
ARLTASIAEVRRLGVVNYFDSQRFGSLKHGQGFIVKDLMRGDFEVALRNILARPSDLDQS
GDARVKAFWKEHWGEWDRRNPYPGAERYQAVVKWLKAHPTDHRGAILRTEPRWRALQVFA
YQSWLWNEGVKQLLKDVVGMARLVSIRYQAGSLLFPRELDAAQARQLHDRTFPLLAPGTR
FSDPAIEKAALSVLGREGQELADLSVPGTPEIHFEPEERPLLVFPGRLAVGEAKPDELNR
GRLRVNVAFTLPPGAYATLVVKRLFHWTLAPGRRATPVAAPGTAAARRAAPARPGAQAAP
PEPAAPRAAKQGFLARRRAEKEARQQRREAAKKRS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaagcagaggccggaggacttccaggtcaccgagtcgtggcgtttcgaggag
gacccgcgaggcgcgcacttcgtgtacctgatggacaagcagaagctctccacgttcgag
gcggtcgaacggatctgcgccgggttcaagatcccgcgcgcggcggtgagctactgcggc
ctcaaggacaagcagggacgcaccacccagctcatcgcgatccagggccgggagatcgag
ctgcaggaccccgacctccgcctgaagccgctcggccgcgcggctgagccgctctcggcg
gcgaacaccacctccaaccgcttcgcggtgacggtgcgcgacctcggcgaggacgacgtc
gcccggctgaccgcgtccatcgcggaggtccggcgcctcggcgtcgtgaactacttcgac
tcgcagcgcttcggatcgctgaagcacggccagggcttcatcgtgaaggacctgatgcgc
ggcgacttcgaggtcgcgctgaggaacatcctcgccaggccgagcgatctcgatcagtcg
ggcgacgcgcgcgtgaaggcgttctggaaggagcactggggggagtgggaccgccgcaac
ccgtacccgggagcggagcgctaccaggcggtggtcaagtggctcaaggcgcaccccacc
gatcaccgcggagccatcctccgtaccgagccgcgctggcgcgcgctccaggtgttcgcc
taccagagctggctgtggaacgagggcgtgaagcagctcctgaaggacgtggtcgggatg
gcgcgcctcgtgtcgatccgctaccaggcgggctcgctcctgttcccgcgcgagctcgac
gcggcgcaggcgcgtcagctccacgaccggacgttcccgctcctcgcccccggcacgcgc
ttctcagatccggcgatcgagaaggccgcgctctcggtgctcgggcgtgagggccaggag
ctcgcggatctctccgtgccgggcacccccgagatccacttcgagccggaggagcgcccg
ctcctcgtgttccccggccggctcgcggtcggcgaggcgaagcccgacgagctgaaccgc
ggccggcttcgcgtgaacgtcgcgttcacgctcccgcccggcgcctacgccacgctggtc
gtgaagcggctcttccactggacgctcgcgccggggcgccgcgccacgccggtagccgcg
ccgggcaccgccgctgcccgtcgcgcggcgcccgcgcgcccgggggcgcaggccgccccc
cccgagccggccgctccccgcgccgcgaagcagggcttcctcgcccgccgccgcgccgag
aaggaggcgcggcagcagcggcgcgaggccgcgaagaagagatcctga
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