Anaeromyxobacter sp. Fw109-5: Anae109_1938
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Entry
Anae109_1938 CDS
T00559
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
afw
Anaeromyxobacter sp. Fw109-5
Pathway
afw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
afw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Anae109_1938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afw03021
]
Anae109_1938
03400 DNA repair and recombination proteins [BR:
afw03400
]
Anae109_1938
Enzymes [BR:
afw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Anae109_1938
Transcription machinery [BR:
afw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Anae109_1938
DNA repair and recombination proteins [BR:
afw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Anae109_1938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ABS26141
UniProt:
A7HBP5
LinkDB
All DBs
Position
2198367..2199386
Genome browser
AA seq
339 aa
AA seq
DB search
MVDPIVTKNWRDLIKPRGLVVDQESLSNTYGKFVAEPLERGFGITLGNSLRRVLLSSLQG
AAITSVKIEGVEHEFMTIPEVAEDVTDIILNLKEVLLQIHTNEVKTLRIEADGPREIKAG
DIIADGQVEILNPGHHILTISEGGRVRMEMTARRGRGYVPADKNKVPGQPIGTIPIDALF
SPIRKVNYQVTNARVGQQTDYDKLSLEVWTDGSVAPNDAVAYAAKIVKEQLSIFINFDEA
EEPAEEVKPVEEQKLNENLFRSVDELELSVRSANCLQNANIKTIGDLVQKTEAEMLKTKN
FGRKSLKEIKEILAEMGLSLGMKLENWPPKAAPQGAPKV
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatcccatcgtcacgaagaactggcgcgacctcatcaagccgcgcggcctggtc
gtggaccaggagagcctctccaacacctacgggaagttcgtcgccgagccgctggagcgc
ggcttcggcatcacgctcggcaactcgctgcgccgcgtgctcctctcgagcctgcagggc
gccgccatcacctcggtgaagatcgagggcgtcgagcacgagttcatgacgatcccggag
gtggccgaggacgtcaccgacatcatcctcaacctgaaggaagtcctcctccagatccac
acgaacgaggtgaagaccctccggatcgaggcggacggtccccgcgagatcaaggcgggc
gacatcatcgccgacggtcaggtggagatcctgaaccccggccaccacatcctcaccatc
agcgagggtggtcgggtgcggatggagatgaccgcgcgccgcggccgtggctacgtcccg
gccgacaagaacaaggtgccgggccagcccatcgggaccatccccatcgacgcgctgttc
agcccgatccggaaggtcaactaccaggtcaccaacgcccgcgtcggccagcagaccgac
tacgacaagctgtcgctcgaggtctggaccgacgggtcggtggcgccgaacgacgccgtc
gcctacgcggcgaagatcgtgaaggagcagctctccatcttcatcaacttcgacgaggcc
gaggagcccgccgaggaggtgaagccggtcgaggagcagaagctcaacgagaacctcttc
cggtcggtggacgagctcgagctctccgtgcggagcgcgaactgcctccagaacgccaac
atcaagacgatcggcgatctcgtccagaagacggaggccgagatgctgaagacgaagaac
ttcggccggaagtcgctcaaggagatcaaggagatcctggccgagatgggcctctcgctc
gggatgaagctcgagaactggccgcccaaggcggccccgcagggcgcgcccaaggtctag
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