Anaeromyxobacter sp. Fw109-5: Anae109_2544
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Entry
Anae109_2544 CDS
T00559
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
afw
Anaeromyxobacter sp. Fw109-5
Pathway
afw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Anae109_2544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afw03019
]
Anae109_2544
03009 Ribosome biogenesis [BR:
afw03009
]
Anae109_2544
Enzymes [BR:
afw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Anae109_2544
Messenger RNA biogenesis [BR:
afw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Anae109_2544
Ribosome biogenesis [BR:
afw03009
]
Prokaryotic type
rRNA helicases
Anae109_2544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DbpA
ScsC_N
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABS26745
UniProt:
A7HDE9
LinkDB
All DBs
Position
complement(2947204..2949246)
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AA seq
680 aa
AA seq
DB search
MENFSEGAPAAAPSDYVSQASFDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDV
IVRSKTGTGKTAAFAIPILERIADGRRRPSALVMCPTRELAIQVAQEFTALAKHRDLSVV
AVYGGASMGEQLQKLEAGAEIIVGTPGRIYDHIRRRTLKLDETMVCCLDEADEMLNMGFF
EEVTRILDNLPKDCQQLLFSATVPADIEQIIRDYLTDPETILLSGDEYSVENIHNVMYPA
VDAYPKPRNLLYMIEMEEPETAIVFCNTRNDTSLVAAVLNRNGYDAELLNGDLPQKERER
VMAKVKRGEVRFMVATDIAARGIDISDLTHVINYSLPEDPAVFLHRVGRTGRIGKKGTSL
SIVSGAEIHTLTALQKKFGIAFEEKKLPTPDEARRLWTDRHVVELKDAMSASIFEAFIPL
SQELRNRPDGEYLVAFALKYFFTHHRMERAQDREKAEHKREEHERREKGEVKREGGRRET
RGRDRDRERRGDRDRAGRGERAERPRAEHRERGEPAAAAPESPPLAAAPGAEARAEVEVE
VSASAAEAREGRRTRRGRGARRGGPQGENGAPAPGEDPGNPCSPEGVADVAGANPEQPER
LQRARIFLSLGEQDGADEARVRELLSSVAPGLEPRTIEVRRTHAFLDVAPEVIEDAVQAL
NGKEWGGKTLTAERARRRRR
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggagaacttctcggagggggcgcccgcggcggcgccctcggattacgtttcacaggcc
tctttcgacgagctcgggctgtccgagccggtgcggcgcgccatcgccgagcacggctac
gagcggcccacgccggtgcaggtctcgaccttccgcccggtgcgcgacggcaaggacgtc
atcgtccggtcgaagaccggcaccggcaagaccgccgcgttcgccatccccatcctcgag
cgcatcgccgatggccggcgcaggccgtcggcgctggtgatgtgccccacccgcgagctc
gcgatccaggtggcccaggagttcaccgcgctcgcgaagcaccgcgacctctcggtcgtg
gcggtctacggcggcgcgtcgatgggcgagcagctccagaagctcgaggcgggcgccgag
atcatcgtcggcacgccgggccgcatctacgaccacatccgcaggcgcacgctgaagctc
gacgagacgatggtgtgctgtctcgacgaggccgacgagatgctcaacatggggttcttc
gaggaggtgacccgcatcctcgacaacctcccgaaggactgccagcagctgctcttctcg
gcgacggtccccgcggacatcgagcagatcatccgcgactacctcacggatcccgagacc
atcctgctgtcgggcgacgagtactccgtcgagaacatccacaacgtgatgtaccccgcg
gtggacgcgtacccgaagccgcggaacctcctctacatgatcgagatggaggagccggag
accgcgatcgtcttctgcaacacccggaacgacacctcgctcgtcgcggcggtgctgaac
cggaacggctacgacgccgagctcctgaacggcgacctgccgcagaaggagcgcgagcgg
gtgatggcgaaggtgaagcggggagaggtccgcttcatggtcgcgaccgacatcgccgcg
cgcggcatcgacatctccgatctgacgcacgtcatcaactactcgctgcccgaggacccg
gcggtgttcctccaccgggtgggccgcaccggccgcatcggcaagaagggcacgagcctc
tccatcgtgtccggcgcggagatccacacgctgaccgcgctgcagaagaagttcgggatc
gcgttcgaggagaagaagctcccgacgccggacgaggcgcgccggctctggaccgatcgt
cacgtggtggagctgaaggacgcgatgagcgcgtccatcttcgaggcgttcatcccgctc
tcgcaggagctgaggaaccgcccggacggcgagtacctcgtcgccttcgccctcaagtac
ttcttcacccaccaccggatggagcgcgcccaggaccgcgagaaggcggagcacaagcgc
gaggagcacgagcgccgcgagaagggcgaggtcaagcgcgagggtggccggcgcgagacg
cgcgggcgcgatcgcgaccgcgagcgccgcggcgaccgcgaccgagccgggcggggagag
cgcgcagagcgcccccgggccgagcaccgcgagcgcggtgagccggccgcggcggcgccc
gagtcccccccgctcgccgctgccccgggagctgaggccagagccgaggtcgaggtcgag
gtctcggcgagcgccgccgaggcgcgcgagggacgccggacgcgacgtgggcgcggcgcc
cgccgtggcgggccgcagggcgagaacggcgcgccggcgccgggcgaggaccccgggaac
ccctgctcgccggagggcgtcgccgacgtcgcgggcgcgaaccccgagcagccggagcgg
ctgcagcgcgccaggatcttcctctcgctgggagagcaggacggcgccgacgaggcgcgc
gtgcgcgagctgctctcctcggtcgctccggggctcgagccgcgcaccatcgaggtgcgc
aggacgcacgccttcctcgacgtcgcccccgaggtgatcgaggacgccgtccaggcgctg
aacggcaaggagtggggcggcaagacgctgaccgccgagcgcgcccggcgcaggcgccgc
tag
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