Anaeromyxobacter sp. Fw109-5: Anae109_2913
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Entry
Anae109_2913 CDS
T00559
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
afw
Anaeromyxobacter sp. Fw109-5
Pathway
afw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Anae109_2913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afw03019
]
Anae109_2913
03009 Ribosome biogenesis [BR:
afw03009
]
Anae109_2913
Enzymes [BR:
afw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Anae109_2913
Messenger RNA biogenesis [BR:
afw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Anae109_2913
Ribosome biogenesis [BR:
afw03009
]
Prokaryotic type
rRNA helicases
Anae109_2913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
ABS27113
UniProt:
A7HEG7
LinkDB
All DBs
Position
complement(3371241..3372998)
Genome browser
AA seq
585 aa
AA seq
DB search
MNTFSSVGAHPALLPALDRRGYLEPTSVQAAVLEPAHRGQDLLVSSRTGSGKTVAFGLAL
AETLLGDADAFGEAGPPGALVVAPTRELAVQVQRELAWLFADAGGRVASCVGGMDPRREA
RALAEGTHVVVGTPGRLVDHLERGALDLSALRALVLDEADEMLDMGFREELEKLLGAAPP
DRRTVLFSATLPRPILELAKRYTRDASRIAATPAGEAHADIAYRAHVVAPREREHAVVNV
LREAEPPSALVFRATREAVQHTAVSLGERGFEVVAISGELTQAERTRALKSLRDGRARVL
VATDVAARGLDLPGIALVLHADLPRDAEALQHRSGRTGRAGRKGVAVLLAAPPERYRLER
MLRDAGVRAEWTPVPTAEAIRAGDAERLAADVVALAGDAAEEDLAAARRLAESRSALELA
VALVRRDRSRRPAPEELPETARAAREVPARAEKRAPRAGPPANAVWFRLSLGRARQADPR
WVLPLLCRRGGVTRDEIGKIVIQPEETRFEVAADAAQRFLRAARRPDPRMPDARIELLGT
NPRAGEPRHAPRPVRAEGARRHERADGEPAPPRRSAPAAKRRGPR
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
gtgaacacctttagctccgtcggggcgcaccccgcgctcctccccgctctcgaccgccgc
ggttacctcgagccgacgtccgtccaggccgccgtcctcgagcccgcgcaccgcggccag
gacctgctggtctcgtcacgcaccggctcgggcaagaccgtcgcgttcgggctcgccctg
gcggagacgctgctcggcgacgccgacgccttcggcgaggcaggcccgcctggcgcgctg
gtcgtggcgcccacgcgagagctcgcggtccaggtccagcgcgagctggcctggctcttc
gcggacgcgggtgggcgcgtggcctcgtgcgtgggcgggatggacccgcgccgcgaggcg
cgcgccctcgccgaggggacccacgtcgtggtgggcacgcccgggcgcctcgtcgatcac
ctcgagcgcggcgcgctcgacctctcggccctccgcgccctcgtcctcgacgaggcggac
gagatgctcgacatggggttccgggaggagctcgagaagctcctcggggccgcgccgccg
gatcgccggaccgtgctcttctcggcgaccctgccgaggccgatcctcgagctcgcgaag
cgctacacgcgcgacgcgtcgcgcatcgccgccacgcccgccggcgaggcgcacgccgac
atcgcctaccgggcgcacgtcgtcgcgcccagggagcgggagcacgcggtggtgaacgtg
ctgcgcgaggcggagcctccgagcgccctcgtcttccgcgcgacgcgcgaggcggtgcag
cacaccgccgtgagcctgggcgagcggggcttcgaggtggtcgccatctccggcgagctc
acccaggcggagcggacgcgggcgctcaagtcgctgcgcgacggccgcgcccgcgtcctg
gtcgcgacggacgtcgccgcgcgcgggctggacctccccggcatcgccctcgtgctgcac
gccgacctgccccgcgacgcggaggcgctgcagcaccgcagcggccgcaccggccgggcg
gggcggaagggcgtcgccgtcctcctcgccgcgccgcccgagcgctaccggctcgagcgg
atgctccgcgacgcgggggtgcgcgccgagtggacgccggtgccgaccgccgaggccatc
cgcgcgggcgacgccgagcggctcgccgcggacgtggtcgcgctcgccggagacgccgcg
gaggaggatctcgcggcggcgcggcggctcgccgagagccgctccgcgctcgagctggcg
gtcgcgctcgtgcggcgcgatcggtcgcggcgccccgcccccgaggagctgcccgagacg
gcacgcgccgcccgcgaggtgccggcgcgcgccgagaagcgcgcgccgcgcgccgggccg
cccgcgaacgcggtgtggttccggctctccctcggccgcgcgcggcaggcagatccgcgc
tgggtgctgccgctcctctgccggcgcggcggcgtgacccgcgacgagatcgggaagatc
gtcatccagcccgaggagacgcgcttcgaggtcgccgccgacgcggcccagcgcttcctc
cgcgccgcgcggcggcccgacccgcgcatgcccgacgcgcggatcgagctcctgggcacg
aacccgcgcgccggcgagccgcggcacgccccgcgtccggtccgggcggagggggcgcgg
cgtcacgagcgcgcggacggggagccggcgccgccgcggcggagcgcgccggccgccaag
cggcgcgggccgaggtag
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