Anaeromyxobacter sp. Fw109-5: Anae109_3552
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Entry
Anae109_3552 CDS
T00559
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
afw
Anaeromyxobacter sp. Fw109-5
Pathway
afw03030
DNA replication
afw03430
Mismatch repair
afw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Anae109_3552
03430 Mismatch repair
Anae109_3552
03440 Homologous recombination
Anae109_3552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afw03032
]
Anae109_3552
03400 DNA repair and recombination proteins [BR:
afw03400
]
Anae109_3552
Enzymes [BR:
afw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Anae109_3552
DNA replication proteins [BR:
afw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Anae109_3552
DNA repair and recombination proteins [BR:
afw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Anae109_3552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ABS27733
LinkDB
All DBs
Position
4163155..4166808
Genome browser
AA seq
1217 aa
AA seq
DB search
MPDFVHLHLHTLYSLLDGAIRIKDLLKTVQAKGMKTVAVTDHGNLFGAVDFYKKAKDAGV
KPIMGMEAYVAGDKGRHDRSERVGRHLILLAKNAEGWANLRFLSSKAFTEGFYYDPRIDK
QLLRDHSKGLVGLTACLAGEVPRLARQGDMDGARRVAREYRDIFEPGSFFLEVQSNGMRE
QLDVNAKLAQLGRDEGIPLVATADAHYVSRQDAKAHEVLMCIASNKTFQDPKRLRHETDG
LFIQSPDDMVAALPEYREAIDNTIRIAEMCNVELQLGKSFLPRFQLPDGVSEEEWIEKLA
KDGLDARFREIDGKYPHDRDAYRQRLEMELGVIKKMGFSGYFLIVQDFINWGKQHQIPVG
PGRGSGAGSIVAWSLRITDLDPLRWNLLFERFLNPERVSMPDFDVDFCQNRRDEVIDYVR
EKYGKDNVGQIITFGSLKARSVIRDVVRVMGLPFAEGDKIAKLVPDPVQGKTPPLKELVF
GSDKMPAEPRLEELYKKPTVISQWVDEKGVQHTVTTKDLLDIAMSLEGLNRQAGLHAAGV
VIADKPLWDYVPAYKDDKSEMLVSQFAKEEVEAAGLVKFDFLGLKTLTVIDDALRMVKQN
HPEMKDFTAADIPIDDPKVYELISRGDTAGVFQMESSGFTEMVIKMKPSRFEDVIAAGAL
YRPGPLDQKLEDGRTMVDVYIDRKHGREKVVYDHPKLEPVLEPTYGVIVYQEQVMQISQV
LAGYSLGQADLLRRAMGKKKAEVMAKERVGFLAGAVKSGVDEKVAGGIFDLMEKFAAYGF
NKSHSAAYGLLTVQTAWLKAHYPVEFMAALISSEASNTDKVVLHISEARADGIEVLPPDV
NESDKDFGAFGPAESARPSTGPGRAANKGRIRFGLGAVRGVGDSAVQAILEARAEGGPFK
TLYDLASRVDSKKINKKVVEALVKSGALDFEGVPRWQLFAGIDSAFAAGASAQADRASGQ
ASLFGALPAAQVEQKPRYPRPGDVVGELTVEEWPERVRLAFEKEALGFYLTGHPLQGYEK
EVRRYASTTCAAVANKRHGDKVSVVGVVAAVRERMNKEKGTRFGFLTLEDLTGTVEVVCW
AARPANGQRPAQKGWTDWEVFCKSDEPLLVHGEVRINNREEENPRAEITALDIEPLALVR
KQKTSEIALRIDADRLTKERTTDLKALLGRHPGGCAITVRAVIPEESETTLSVAARVEPG
DELLEAARRLGFEVELR
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacttcgtccacctgcacctgcacacgctctactccctcctcgacggcgcgatc
cgcatcaaggacctgctcaagaccgtccaggcgaaagggatgaagaccgtcgcggtcacc
gaccacggcaacctcttcggcgcggtggacttctacaagaaggcgaaggacgcgggcgtg
aagcccatcatgggcatggaggcgtacgtcgcgggcgacaagggccggcacgaccgctcc
gagcgcgtgggccggcacctcatcctcctcgccaagaacgcggaggggtgggcgaacctc
cgcttcctctcctccaaggccttcaccgagggcttctactacgacccccgcatcgacaag
cagctcctgcgcgaccactcgaagggcctcgtcggcctgacggcctgcctcgccggcgag
gtgccgcgcctcgcccgccagggcgacatggacggcgcgcgccgcgtcgcgcgcgagtac
cgcgacatcttcgagccgggctccttcttcctggaggtgcagtcgaacgggatgcgcgag
cagctcgacgtgaacgccaagctcgcccagctcgggcgcgacgagggcatccccctcgtg
gcgacggccgacgcccactacgtctcccgccaggacgcgaaggcacacgaggtcctcatg
tgcatcgcgtccaacaagacgttccaggacccgaagcgcctgcggcacgagacggacggg
ctcttcatccagtcgcccgacgacatggtcgcggcgctcccggagtaccgcgaggcgatc
gacaacacgatccgcatcgccgagatgtgcaacgtcgagctgcagctcgggaagtccttc
ctcccgcgcttccagctccccgacggcgtctcggaggaggagtggatcgagaagctcgcg
aaggacgggctcgacgcccgcttccgcgagatcgacggcaagtacccgcacgaccgcgac
gcgtaccggcagcggctcgagatggagctgggcgtcatcaagaagatggggttcagcggg
tacttcctcatcgtccaggacttcatcaactgggggaagcagcaccagatccccgtcggc
ccgggccgcggctcgggcgcgggctccatcgtggcctggtcgctgcgcatcacggacctc
gaccccctgcgctggaacctgctcttcgagcggttcctgaaccccgagcgcgtgtcgatg
ccggacttcgacgtcgacttctgccagaaccggcgcgacgaggtcatcgactacgtccgc
gagaagtacggcaaggacaacgtcggccagatcatcaccttcggctcgctcaaggcgcgc
tccgtcatccgcgacgtcgtccgcgtgatggggctgcccttcgccgagggcgacaagatc
gcgaagctcgtcccggacccggtccagggcaagaccccgccgctcaaggagctcgtgttc
ggcagcgacaagatgccggccgagcccaggctcgaggagctctacaagaagcccaccgtc
atctcgcagtgggtggacgagaagggcgtccagcacacggtcaccacgaaggacctgctc
gacatcgcgatgagcctcgagggcctgaaccgtcaggccgggctccacgcggcgggcgtc
gtcatcgcggacaagccgctctgggactacgtgccggcgtacaaggacgacaagtccgag
atgctggtctcgcagttcgcgaaggaggaggtcgaggcggcaggcctcgtcaagttcgac
ttcctcggcctcaagaccctcaccgtcatcgacgacgcgctccggatggtgaagcagaac
caccccgagatgaaggacttcaccgccgccgacatccccatcgacgaccccaaggtctac
gagctcatcagccgcggcgacaccgccggcgtcttccagatggagtcctcgggcttcacc
gagatggtgatcaagatgaagccctcgcggttcgaggacgtcatcgccgcgggcgcgctc
taccggccgggccccctcgaccagaagctcgaggacggccgcaccatggtcgacgtctac
atcgaccgcaagcacggccgcgagaaggtggtctacgaccaccccaagctcgagccggtc
ctggagccgacctacggcgtcatcgtctaccaggagcaggtgatgcagatctcgcaggtc
ctggcgggctactcgctgggacaggcggatctcctgcgccgcgcgatggggaagaagaag
gccgaggtcatggccaaggagcgcgtgggcttcctcgcgggcgccgtgaagagcggcgtc
gacgagaaggtcgccggcggcatcttcgacctcatggagaagttcgcggcgtacggcttc
aacaagtcgcactccgccgcgtacggcctcctcaccgtccagaccgcctggctcaaggcc
cactatccggtggagttcatggccgcgctcatctcgagcgaggcgtcgaacaccgacaag
gtcgtgctgcacatctccgaggcgcgcgccgacggcatcgaggtgctgccgccggacgtg
aacgagtccgacaaggacttcggcgcgttcgggccggccgagtccgctcgtccttcgacg
ggcccaggacgagcggccaacaagggccgcatccgcttcggcctcggcgcggtgcgcggt
gtgggcgactcggcggtgcaggcgatcctcgaggcgcgcgcggagggtgggccgttcaag
acgctctacgacctcgcctcgcgcgtggactcgaagaagatcaacaagaaggtggtcgag
gcgctcgtgaagtcgggcgcgctcgacttcgagggcgtgccgcgctggcagctgttcgcc
ggcatcgactccgccttcgccgccggcgcctccgcccaggccgaccgcgcctcgggccag
gcgagcctcttcggcgccctccccgccgcgcaggtggagcagaagccgcgctacccgcgg
ccgggcgacgtcgtcggcgagctcaccgtcgaggagtggccggagcgcgtacggctcgcc
ttcgagaaggaggcgctcggcttctacctcaccggccacccgctgcagggctacgagaag
gaggtccggcgctacgcctcgaccacctgcgccgcggtcgcgaacaagcggcacggcgac
aaggtctcggtggtcggcgtggtcgccgccgtgcgcgagcggatgaacaaggagaagggc
acgcgcttcggcttcctcacgctcgaggacctcaccggcaccgtcgaggtcgtgtgctgg
gcggcgcgcccggcgaacggccagcggcccgcgcagaagggctggaccgactgggaggtc
ttctgcaagtccgacgagccgctgctcgtccacggcgaggtgcggatcaacaaccgcgag
gaggagaacccgcgggcggagatcaccgccctcgacatcgagccgctcgcgctcgtgcgg
aagcagaagacgtccgagatcgcgctccgcatcgacgccgatcgactcacgaaggagcgc
acgaccgacctgaaggcgctcctcggccggcaccccggcggctgcgccatcaccgtgcgc
gccgtgatcccggaggagtcggagaccacgctctcggtcgcggccagggtcgagcccggc
gacgagctgctcgaggccgcgcgcaggctcgggttcgaggtggagctgcgctga
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