Alicyclobacillus mengziensis: JZ786_03020
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Entry
JZ786_03020 CDS
T07322
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
afx
Alicyclobacillus mengziensis
Pathway
afx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
afx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JZ786_03020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afx03021
]
JZ786_03020
03400 DNA repair and recombination proteins [BR:
afx03400
]
JZ786_03020
Enzymes [BR:
afx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JZ786_03020
Transcription machinery [BR:
afx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JZ786_03020
DNA repair and recombination proteins [BR:
afx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JZ786_03020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
QSO48016
UniProt:
A0A9X7Z8B7
LinkDB
All DBs
Position
664123..665061
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AA seq
312 aa
AA seq
DB search
MIEIEKPKIEAVESSERYGKFVVEPLERGYGTTLGNSLRRILLSSIPGAAVRTVKIEGVL
HEFSTIPGVVEDTTELVLNIKRLALKIHSDEEKTLVIDAEGAGPVTAADIRADSDVDIMN
PDLHLATLSDGAHLYAELIAGRGRGYVSADRNKMGEQEIGVIPIDSLYSPVTRVNFQVEN
TRVGQVTDYDKLTLEVWTDGSVTPEEAVSLGAKILTEHLLLFVGLNEQGKDTDIMVEKED
TSSDKTLEMPIEELDLSVRSYNCLKRAGINTVGELCSRTEEEMMKVRNLGRKSLEEVVEK
LGALGLSLREDE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaattgagaagccgaaaattgaggctgttgaatcgtcagagcggtatggaaaa
ttcgtagtcgaaccgctggaacgcggatacggtacgacgctaggaaactcgctccggcga
attctactgtcctcaatccctggcgcagctgttcgaacggtgaaaattgaaggtgtgttg
cacgagttttcaacgattcctggtgtcgtagaagacactactgaattggtcttaaacatc
aaacgattagcactgaagatccattcagatgaagagaagactctggtcatcgacgccgag
ggcgccggacccgtgacagctgcagatattcgggccgactctgacgtagacatcatgaat
ccggatttgcatcttgcgacgctcagtgatggtgcccatttatatgctgaattaatcgcg
ggacgtgggcgcggatacgtttcggcggatcgcaataagatgggagaacaggagattggg
gtcattcccatagattctctgtactcgcctgtcacgcgcgtgaacttccaggttgaaaac
actcgtgttggccaagtcacggactacgacaaacttacacttgaagtctggacagacggc
agtgtaacgccagaggaagctgtcagtctgggagcaaaaatcttgactgagcatcttctg
ctgtttgtcggtttgaacgagcagggtaaagacacggatattatggtcgaaaaagaagat
acctcttctgacaagaccttggaaatgccaattgaagaacttgacctgtcggttcgctcc
tataattgcttgaaacgcgcgggaatcaacaccgtcggcgaactgtgttcacgtaccgaa
gaagagatgatgaaagtgcgcaaccttggacgcaagtcgttggaagaagtcgtggagaaa
ctcggagcccttggactttcgcttcgggaagacgaataa
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