Alicyclobacillus mengziensis: JZ786_12465
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Entry
JZ786_12465 CDS
T07322
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
afx
Alicyclobacillus mengziensis
Pathway
afx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JZ786_12465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afx03019
]
JZ786_12465
03009 Ribosome biogenesis [BR:
afx03009
]
JZ786_12465
Enzymes [BR:
afx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JZ786_12465
Messenger RNA biogenesis [BR:
afx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JZ786_12465
Ribosome biogenesis [BR:
afx03009
]
Prokaryotic type
rRNA helicases
JZ786_12465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
SBF_like
Motif
Other DBs
NCBI-ProteinID:
QSO45405
UniProt:
A0A9X7VVJ7
LinkDB
All DBs
Position
2679166..2680746
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AA seq
526 aa
AA seq
DB search
MSSFQDFALSRRVQQAIDGMGFEEPSPIQAACIPLVLTGRDVIGQAQTGTGKTAAFGVPM
IEQVSTEGRVEGLVLTPTRELAIQVAGEFRKIGKFKRVRTLPIYGGQSIGHQIRALQQGV
QIVVGTPGRVLDHIRRGTLRFDNLKTVVLDEADEMLDMGFIEDIETILKETPAHRQTMLF
SATFTPEIKRLAVRYMKDPEHVTVNRGEITVPLTEQVYYKVLERNKLESLCRVIDSEEVE
LGIIFCRTKRGVDELVEALVARGYLVDGLHGDLSQAQRDRVMRKFRTNEIELLVATDVAA
RGIDVDNVTHVINYDIPQDPESYVHRIGRTGRAGKRGLAITLVTPREFKLLKQIERETKT
SMTSREVPTLADVAERQAEIWRNRLVETIQSGGLGHYRALLGNMVDEYDPVDIACAALKL
SSAGELQGDEEEEYDFGETGGGPGMVRFFVNIGRGAHIGPADLVRAISEEAGVPGQVVGK
IDIFDRFTFVEIEEDSAPFVYEAMRKGRINGARINMEPARPRARTR
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatttcaggattttgcacttagcaggcgggtacagcaagcgattgacggaatg
ggttttgaagagccgtctccgattcaggcagcgtgtatcccactcgtcctcactggacgg
gatgtgattggacaggcccagacaggtactgggaagacggcagcttttggtgtgccgatg
attgaacaggtgtcaacagaaggacgagttgagggtcttgtgctaactccgacgcgtgag
ttagcgattcaggtcgcaggagagtttcgcaagattggcaaattcaagcgggtacgtaca
ctgccgatttatggcggacagtctatcgggcaccagattcgtgcactgcaacagggtgtc
cagattgttgtcggaacacccggacgtgtactagaccacattcggcgcggtacgctgcgg
tttgacaacttaaagaccgtggtcctcgatgaggccgacgagatgctcgacatgggcttc
attgaagacattgaaaccattctgaaggaaacgccagcacatcggcagacgatgcttttt
tcagcgacgttcactcctgagattaagcgccttgctgttcgctacatgaaggacccggaa
catgttacagtaaaccgcggagagatcaccgttcccctcaccgaacaggtgtactacaag
gtgctcgagcggaacaaactcgagagtttgtgccgggtcatcgacagcgaagaggtagaa
ctcggcatcattttctgccggaccaagcgtggcgtcgacgaactggtggaagctcttgtc
gctcgcggataccttgtcgacggactgcacggggatttgagccaagctcaacgcgacagg
gtcatgcgcaagttccgcaccaacgagatcgaactgctggttgcgacagacgtcgccgct
cgtggcatcgacgtcgacaacgtcacgcatgtgattaactacgacattccacaggaccct
gagtcatatgtgcaccgcatcggcagaacggggcgtgcaggcaagcgcggtctcgctatc
acactcgtaaccccgcgcgagttcaaactgctcaagcaaatcgaacgcgagacaaaaact
tccatgacgtctcgtgaagtgccaacactggcggatgttgcggagcgtcaagcagaaatt
tggcgcaatcgcctcgtcgagaccattcaaagcggtggtctcggacattaccgtgcactt
cttggcaacatggtggatgagtacgatccggtggacattgcctgcgcggccctgaagctc
tcttcggccggtgaactgcagggtgacgaggaagaagagtacgattttggcgaaacaggc
ggcggccctggcatggttcgtttcttcgtgaacatcggccgcggtgcacacattggcccg
gcggatttggtccgtgccatttccgaagaggcaggtgtgccgggtcaggtggtcggcaag
atcgacatctttgaccgcttcacgtttgtagagatcgaggaagattcagcaccgttcgtc
tatgaggcaatgcgcaaaggccgcatcaatggcgcccgcatcaacatggaacctgcccgt
ccacgcgctcgcacacgctga
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