Acidihalobacter ferrooxydans: BW247_01460
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Entry
BW247_01460 CDS
T09791
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
afy
Acidihalobacter ferrooxydans
Pathway
afy00300
Lysine biosynthesis
afy00470
D-Amino acid metabolism
afy01100
Metabolic pathways
afy01110
Biosynthesis of secondary metabolites
afy01120
Microbial metabolism in diverse environments
afy01230
Biosynthesis of amino acids
Module
afy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
afy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BW247_01460
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BW247_01460
Enzymes [BR:
afy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BW247_01460
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DNA_pol_B_2
Motif
Other DBs
NCBI-ProteinID:
APZ41925
UniProt:
A0A1P8UDK5
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All DBs
Position
311639..312886
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AA seq
415 aa
AA seq
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MDYFNDRDGVLHAEDVPVTELAERFGTPCYVYSRATLERHWRAFDAALGDHPHLICYAVK
ANSNLAVLNLLARLGSGFDVVSGGELERVLRAGGDPARTVFSGVGKQVWEMRRALEVGIR
CFNIESGAELERLNDVAGATGCRAPVSLRVNPDVDAGTHPYISTGLRENKFGVDVDTAMA
LYRRAAELPHLDVAGIDCHIGSQLTRLAPLRDALDRLLDMIDRLAAEGIAVRHLDLGGGL
GIRYRDETPPGPAAYARALRERIGDRALEIMLEPGRAIAGNAGILLTRVEYLKHTPERHF
ALVDAAMNDLIRPALYGGWHDIVPVVQGSPAEMRAYDVVGPVCESADFLGKERMLALTAG
DLLAVRSAGAYGFVMSSNYNTRPRAAELLVDGTQVYVVRERENFEQMVAGECLLP
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggattatttcaatgaccgcgacggtgtgctgcatgccgaagatgtgcctgtcaccgaa
ctggccgaacgtttcggcacaccctgttacgtgtactcgcgggcgacgctcgagcggcac
tggcgggcgttcgatgcggcgctcggcgatcatccccacttgatctgttatgcggtgaag
gcgaactccaatctggccgtgctgaacctgttggcccggctcggttcgggcttcgacgtg
gtttcgggcggcgaactcgagcgtgtgctgcgcgccggcggcgatccggcgcggaccgtg
ttctccggggtcggcaagcaggtgtgggaaatgcgccgcgcgctagaagtcggcatccgc
tgcttcaacattgaatccggggccgaactcgaacggctgaacgatgtggccggagcaaca
ggctgtcgggcgccggtctcgctgcgcgtcaaccccgacgtggatgccggcacgcacccc
tacatttccaccggtctgcgcgaaaacaagttcggcgtggacgtggacacggccatggcg
ctctatcggcgcgcggccgagctgccgcatctcgatgttgccgggatcgattgccacatc
ggctcgcaactgacccggcttgcgccgctgcgcgatgcgctggatcggctgctcgacatg
atcgaccgactggcggcggaaggtattgccgtgcgtcatctggacctcggcggcgggctc
ggtatccgctatcgcgacgaaacgccacccggaccggctgcgtacgcccgcgccctgcgc
gagcgtatcggagaccgcgcgctggaaatcatgctcgaaccaggccgcgcgatagccggc
aacgcaggcattctactgacgcgggtggagtatctgaaacacacccctgagcggcacttt
gcgctggttgacgcggcgatgaacgacctgatccgaccggcactgtacggtggctggcac
gacatcgttccggtcgtgcagggctcgccggccgagatgcgcgcctacgacgtggtcggg
ccggtgtgcgagtcggcggactttctgggcaaggaacgcatgctggcgctgacggccggc
gatctgctggcggtgcgttcagccggtgcgtatggctttgtgatgagttcgaactacaac
acgcgtccgcgggctgctgaactgctggtggacgggacgcaggtatacgtagtgcgcgag
cgggagaatttcgagcagatggtggccggggaatgcctgctgccctga
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