Acidihalobacter ferrooxydans: BW247_05340
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Entry
BW247_05340 CDS
T09791
Name
(GenBank) hypothetical protein
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
afy
Acidihalobacter ferrooxydans
Pathway
afy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BW247_05340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afy03400
]
BW247_05340
DNA repair and recombination proteins [BR:
afy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BW247_05340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
QSregVF_b
Motif
Other DBs
NCBI-ProteinID:
APZ44555
UniProt:
A0A1P8UL68
LinkDB
All DBs
Position
complement(1140341..1141072)
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AA seq
243 aa
AA seq
DB search
MPDHTHELADTTFAVIDCEATGLNLEQDRPVEAAVVLLHPDGSVEPTLETLIDPRIPIPA
TASAIHHLVDDDVYGAPSLADIQPELTATGDAFAAHNAPYDRTMLGLTHTANPWICTWRL
AMHLWPQAPAHGNQVLRYWLHLDVPQAKGLPAHRAMADALVTAAVLRQGLLELHSREDAP
ESAEALAEWIARPAELQHVPFGKHRGRPWKDMDCGFLEWVLERDFSVDVRHTAALWLERQ
RIV
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaccacacacatgaacttgccgacaccacgttcgccgtcatcgactgcgaggcc
actgggcttaacctcgaacaggaccggcccgtcgaagccgcggttgtcttgttgcatccg
gatggcagcgtggaacccacactcgaaaccttgattgatcctcgtatcccaatccccgca
acggcttctgcgattcaccatttggtcgacgacgacgtgtacggagcaccgtcgcttgca
gatatccagcctgaactcactgccacaggtgacgccttcgccgcgcacaatgcgccgtat
gaccgcacgatgctcgggctcactcacaccgcaaatccctggatatgtacctggcgcctg
gcgatgcatctctggccgcaggcacccgcgcacggcaaccaggtccttcggtattggctc
cacctcgatgttccgcaggccaaaggcttgcccgcgcaccgcgcaatggccgacgcactg
gtaacagccgctgtgcttcgccaaggactgctcgaattgcactcgcgcgaggatgcaccc
gaaagcgccgaagcgttggccgagtggatagcacgtccggccgaacttcagcatgtgccg
ttcggcaaacatcgcggacggccatggaaggatatggattgcggtttccttgagtgggtg
ctggaacgtgatttttctgtcgatgttcgccacaccgccgcactttggcttgagcggcaa
aggatcgtctga
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