Acidihalobacter ferrooxydans: BW247_09530
Help
Entry
BW247_09530 CDS
T09791
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
afy
Acidihalobacter ferrooxydans
Pathway
afy03030
DNA replication
afy03430
Mismatch repair
afy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BW247_09530
03430 Mismatch repair
BW247_09530
03440 Homologous recombination
BW247_09530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afy03032
]
BW247_09530
03400 DNA repair and recombination proteins [BR:
afy03400
]
BW247_09530
Enzymes [BR:
afy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BW247_09530
DNA replication proteins [BR:
afy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BW247_09530
DNA repair and recombination proteins [BR:
afy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BW247_09530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
APZ43308
UniProt:
A0A1P8UHJ0
LinkDB
All DBs
Position
complement(2028233..2031763)
Genome browser
AA seq
1176 aa
AA seq
DB search
MQPSFVHLSLHTEYSLVDSVLRISPLMKRLAELEMPAVALTDQSNLFAMVKFYRAAQRHG
IKPIIGVDTWVRRPGRPGAADDGAPARVLLLCQNDIGYRNLTRLISRGYQHGQYSGTPML
DFDWLDGASDGLIALSGGRTGEIGRALLAGNADNAAALLEQWHALFPDRFYLEVQRTGRE
GDEAYLHAAVGLAAATDTPVVATNDVRFLQPEDFAAHEARVCIRDGDMLADPRRIRRYSE
QQYLRSAQEMTALFADLPEALENSVEIAKRCNVKLTLGNTVLPQFPVPEGMSTQAYLRRA
AEQGLEARLDGLFDRSAENFAEQAQPYYARLQRELDVIIEMGFPGYFLIVADFIQWAKQN
GVPVGPGRGSGAGSLVAYSLKITDLDPIRYDLLFERFLNPERVSMPDFDVDFCMEGRDRV
IDYVAERYGRNQVSQIITYGSMAAKAVVRDVGRVLGHPYGFVDRIAKLIPFELGITLDKA
LAQEEELKRAYTDEEEVTALIDLARSLEGLARNAGKHAGGVVIAPSDLTDFTPLYCEEGG
GSLVTQFDKDDVEAIGLVKFDFLGLRTLTIIDWAVQNIDRGRAADEPPVDINQLPLDDKA
TYELLKRHQTTAVFQLESTGMQELIKRLQPDNFEDIIALVALYRPGPLQSGMVDDFINRK
HGRARVEYPHPALEPILKPTYGVILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRAIFTEGAVGQGVDEGVATYIFDLMEKFAGYGFNKSHSAAYALLSYQTAWLKTHHRA
AFMAAVLSADMDNTDKVVNLIEECRRLDLKVMPPDINRSAHRFTVLDEHTILYGLGAIKG
VGESAIGSMLEERTAGGTFADLNDLCKRLIGQKVNRRALEALIRGGALDLIGHNRATLMA
SLPEAVRAAEQYRRDADLGQVDLFGNAPELELGLAPAPLPEWPEDERLAAEKETLGLYLT
GHPIERYQSELAHMVTAPIEAWLQDEPSDGSRGRGERKERTVVVAGLVVGLNTRNGPSGR
FAFVTLDDRTGRLEVGVFGEEYETYADLLVKDALVVIEAGIGVDNFSGRQRVRARRVYSI
EQARARFAQNLELTVSNEGSLNGFIGELEHTLKPFRQGGCPVFVQYRGRSASARLKFGDA
WQVRPSDELLHRLRQLAGEQNVHLRYATNGNGQPDS
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccttcgttcgtccatctttcgctccacaccgagtattcgctggttgacagcgta
ctgcgcatttcgccattaatgaaacgcttggcggaacttgagatgccagcggtggcgctg
accgatcagagcaatctgttcgccatggtcaagttctaccgcgccgctcagcgccatggc
atcaaaccgattatcggtgtggatacctgggtgcgtcgccccgggcggccgggagcggct
gacgatggcgcgcccgcccgtgtgttactgctgtgccagaacgacattggctatcgtaat
ctgacccgcctgatttcccgcggttatcagcatggacagtatagcggtacgccgatgctc
gatttcgattggctcgatggtgcaagcgatggcctgatcgcgttgtcgggagggcgaacc
ggagagattggccgcgcgctgctggccggcaacgcggacaatgcggcggccctgcttgag
caatggcacgcactgtttccggatcgtttttaccttgaggtgcagcgcaccggccgcgaa
ggtgacgaggcttacctgcacgccgcagtcgggcttgcggcagcgaccgataccccggtg
gtggcgaccaatgacgtgcggtttttgcagcccgaggatttcgcggcccacgaggcacgc
gtgtgcatccgcgatggcgacatgctcgccgatccgcgccgcatcaggcgctacagcgaa
caacagtatctgcgttccgctcaggaaatgacggccttatttgcggacttgccggaggcg
ctggagaacagcgtggaaatcgccaagcgctgcaacgtcaaactgacgctcggcaatacg
gtattgccgcaatttccggtaccggagggcatgagtacgcaggcgtatctgcgccgcgca
gccgagcagggtctggaagcccgactcgatggactgttcgaccgcagcgcagagaatttc
gccgagcaggcacaaccgtattacgctcgcctgcaacgcgaactcgatgtcatcattgaa
atggggttccccggttacttcctgattgtggccgactttatccagtgggcgaagcaaaac
ggcgtgccggtcgggccggggcgtggctcaggcgccgggtcgctggtcgcgtattccctg
aaaataactgacctggatccaatccgttacgaccttcttttcgagcgatttctcaacccg
gaacgtgtctccatgccggacttcgacgtcgacttctgcatggaagggcgcgaccgcgtc
atcgattacgtggccgaacgctacggtcgcaatcaggtttcgcagatcatcacttacggc
agcatggcagccaaggcagtagtgcgcgacgtgggtcgcgtactgggccatccgtacggt
ttcgtcgaccgtatcgccaagctgatcccgttcgagctcggcatcacactcgacaaggcg
ctggcgcaggaggaggagctcaagcgtgcctacacggacgaggaggaagtcaccgcgctg
atcgatcttgcgcgcagtcttgaagggctcgcgcgcaacgccggcaaacacgccggcggc
gtggtgatcgcgccgagcgatttgacggatttcacgccgctgtactgtgaagagggcggc
ggcagcctggtcacgcagttcgataaagacgacgtcgaggcgattggtctggtcaagttc
gattttctcggcctgcgcacgctcaccatcatcgactgggcggtgcagaacatcgaccgt
ggccgcgccgccgacgagccgccagtggatatcaatcagctaccgctggacgacaaggcg
acctacgagttgctcaagcggcatcagaccactgccgtgttccagctcgaatccacgggc
atgcaggaactgatcaagcgtctgcagcccgataacttcgaggacattatcgcgctggtc
gcgctctaccgtccggggccgctgcagtcgggcatggtcgacgatttcatcaaccgcaag
cacgggcgagccagggtcgagtatccgcatccggcgctggagccgatcctcaagccgacc
tacggcgtgattctgtatcaggaacaagtcatgcagatcgcgcaggtgctggctggctac
acactgggcggcgcggacatgctccgccgcgcgatgggcaagaagaagcccgaggaaatg
gccaagcagcgcgcgattttcaccgagggcgcggtcggacagggcgttgatgaaggtgtc
gcgacctatatcttcgatctgatggagaaattcgccggctacggtttcaacaaatcacat
tcggcggcctatgccttgctgtcctaccagacggcctggctcaaaacacaccatcgcgcc
gcattcatggcggccgtgctctcggcggacatggacaacaccgacaaggtggtcaatctg
atcgaggaatgccggcgtctcgatctgaaggtgatgccgcctgacatcaaccgttccgcg
caccgtttcaccgtgctcgacgaacacaccattctttacggtctgggcgcgatcaagggc
gtcggcgagtcggccatcggcagcatgctcgaagagcgcaccgccggcggcacattcgcg
gatctgaacgatctgtgcaagcggctgatcggacaaaaggtcaaccgccgcgcccttgaa
gcgctgattcgcggcggcgcgctggaccttatcggccataaccgcgccacgctcatggcc
agtctgccggaagcggtgcgggcggccgagcagtaccgccgggatgccgatctggggcag
gtcgatctgttcggcaacgccccggaacttgaactgggccttgcgcccgcgccgttgccg
gaatggcccgaggacgaacgtctggccgctgaaaaggaaaccctggggctgtatctgacc
gggcatcccatcgaacgctaccagtccgaacttgcgcatatggtgaccgctccgatcgag
gcctggctgcaggacgagccgagcgacggcagccgcgggcgtggcgagcgcaaggagcgc
accgtggttgtcgctggactggtggtcggattgaacacccgcaacgggccgtccggtcgg
ttcgcgttcgtcacgctggatgatcgcactgggcgcctcgaagtcggcgtgttcggcgag
gaatacgaaacgtatgccgatctgctggtcaaggatgcgctggtcgtcatcgaggcgggc
atcggcgtcgataatttcagtggacgccaacgcgtgcgcgccaggcgcgtctacagcatc
gaacaggcgcgcgcccgtttcgcgcagaatctcgaactgaccgtcagcaacgaaggaagt
ctgaacgggtttatcggcgagttggagcacaccctcaagccgtttcgccagggggggtgc
ccggtgttcgtgcagtatcgcggccgcagtgcatccgcacggctgaaattcggcgacgcc
tggcaagtgcgtcccagcgacgaattgctgcatcgcctgcgtcagctcgcaggtgaacag
aatgtgcacctgcgctacgcgacgaacggcaacggtcagccggatagttga
DBGET
integrated database retrieval system
