Acidihalobacter ferrooxydans: BW247_10410
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Entry
BW247_10410 CDS
T09791
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
afy
Acidihalobacter ferrooxydans
Brite
KEGG Orthology (KO) [BR:
afy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afy03016
]
BW247_10410
Enzymes [BR:
afy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
BW247_10410
Transfer RNA biogenesis [BR:
afy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BW247_10410
Prokaryotic type
BW247_10410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
APZ44663
UniProt:
A0A1P8ULI1
LinkDB
All DBs
Position
complement(2209096..2210115)
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AA seq
339 aa
AA seq
DB search
MPRSGASAGHGVIRAQRTDFIVEELPVQEPSGEGEHLWLWVEKQGENTEAVARRLARAAG
VKPLAVGYAGRKDRHALTRQWFSVPLPRGQAWPAGRLASENIRVLRTVRHTRKLRVGALR
GNRFVLRITELEADPVLLERRLQAVREQGVPNYFGEQRFGRSGGNVDAALRLFAGHVERD
RKRRGLYLSAARSALFNGILAERIRAGTWNVLCPGEAVMLDGSNSFFVADEIDDVLQRRL
REGDIHPSGALWGSGELPPRAAVSALELAVAGQAAALSTGLMAAGLKHERRPLRLLPKDM
VWRVDEGARALILEFTLPAGAFATAVLHDLLHYRDGAQR
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
ttgccgcgttccggggcgtcagccggccatggtgtgattcgcgcgcagcggacggatttt
atcgtcgaggaattacccgttcaggaaccgagcggggagggcgagcacctgtggctctgg
gtggaaaagcagggtgagaataccgaggcggttgccaggcgactggcccgtgcggctggc
gtcaagcccttggcggtgggttatgccggccgcaaggaccggcatgcactgacccggcag
tggttcagcgtgccgttgccgcgcggtcaggcgtggccggctggacgcctcgcgagcgag
aacattcgtgtgctgcgcacggtcaggcatacgcgcaagctgcgcgtcggcgccttgcgt
ggcaaccggtttgtgctgcggatcaccgaactggaagctgacccggtcttgcttgagcgc
cgtttgcaggccgttcgcgaacagggcgtgccgaattatttcggtgaacagcgtttcggg
cgatctggtggcaatgtcgacgctgccttacgtctgttcgcgggccatgtggagcgcgac
cggaagcggcgcggactgtatctgtctgcggcgcgcagcgccctcttcaatgggattctc
gcggagcgaatcagagccggcacctggaatgtgctgtgtcccggtgaggcggtcatgctg
gacggctcgaacagtttttttgttgccgatgaaattgacgatgtacttcagcggcgtctg
cgcgagggtgatatccatccttccggcgcattgtggggcagtggtgagttgccgccgcgc
gcggctgtgtccgcattggaactggcagtcgccgggcaggcggcggcgctgagtacgggg
ctgatggctgccgggctcaaacacgaacgacgcccgttacgcctgttgcccaaggacatg
gtctggcgcgtggatgagggtgcgcgtgctctgatacttgagttcacactgcccgccggc
gcatttgcgacagccgttttgcacgacctcctgcactatcgggatggggcgcagcgctga
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