KEGG   Acidihalobacter ferrooxydans: BW247_13875
Entry
BW247_13875       CDS       T09791                                 
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
afy  Acidihalobacter ferrooxydans
Brite
KEGG Orthology (KO) [BR:afy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:afy03400]
    BW247_13875
Enzymes [BR:afy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BW247_13875
DNA repair and recombination proteins [BR:afy03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BW247_13875
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 AAA_22 DEAD
Other DBs
NCBI-ProteinID: APZ44048
UniProt: A0A1P8UJN1
LinkDB
Position
2949361..2951373
AA seq 670 aa
MSTSPELEGLNPTQRAAVKQTDRPLLVLAGAGSGKTRVITAKIAHLVRQRGIDPRGIYAV
TFTNKAAREMKARAAALLSRTESRGLTVSTFHTLGLNLLRLELQHVGLKPGFSIFDAQDS
TALIRELTHKDAPGEADGIRGQISTWKNDLLRPEEALARAENDLQQTAAKVYVAYQRSLA
AYNAVDFDDLILHPVRLLEEHAEARERWQNRVRHLLVDEYQDTNACQYRLMRLLVGVDGG
LTAVGDDDQSIYAWRGARPENLAQLGKDFPRLEVVKLEQNYRSTGRILQSANHLIANNPH
LYEKRLWSALGAGEMLRVLPSKDAEDEATKVVSEIIKRHFQERAGYRDFAILYRGNHQAR
EFERRLREQNVPYKLSGGTSFFARQEIKDVMGYLRLLVNPDDDAAFLRVVNAPRRGIGPS
TLETLGQYAQQRGVGLLAATGELGLEQQLSARALNAVRRFADWAGELARRAADPEADPVG
LTRRLLDDIDYPAWLEETYDDPRAARRRMDNVEELIGWLGRLRTDEPERSLADLVAHMSL
MDILERNNEEQDLDAVNLMTLHAAKGLEFPHVFLVGVEEELLPHRSSIEADTIEEERRLA
YVGITRAQRTLTLTYAEKRKRYGEEIDCEPSRFLEELPGEHLEWRRAAATHEEQRDLGRA
QLANLRALLD
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgagcacatcccccgaactcgaaggccttaacccgacgcaacgcgccgccgtcaaacag
accgaccggccgctgctcgtgctggccggtgccggcagcggcaagacccgcgtgatcacc
gccaagatcgcacatctggtgcgccagcgcggtatcgatccgcgcggcatctacgcggtg
accttcaccaacaaggccgcgcgcgagatgaaagcgcgtgccgcggccctgctctcgcgc
acggaaagccgcggactcaccgtctccaccttccatacgctcggcctcaacctgttgcgc
ctggaacttcagcacgtcggactcaagcccggcttttccatcttcgatgcgcaggacagc
acggcactgatccgcgagctgacgcacaaggacgcgcccggcgaagccgacggcatccgc
gggcagatatccacctggaaaaacgacctgctgcgcccggaagaagcgcttgcccgcgcc
gagaacgacctgcaacagaccgcggccaaggtctacgtcgcctaccagcgctcgctggcc
gcgtacaacgccgtcgacttcgacgacctcatcctgcacccggtgcgcctgctcgaagag
cacgccgaggcccgcgaacgctggcagaaccgcgtgcgccatctgctggtcgacgaatac
caggacaccaacgcctgccagtaccgcctcatgcgcctgctggtcggcgtcgacggagga
ctcaccgcggtcggcgacgacgaccagtcgatctacgcctggcgcggcgcgcgacccgaa
aatctcgcgcagctcggcaaggacttcccgcgcctcgaagtggtcaagctggagcagaac
taccgctccaccgggcgcatcctgcaaagcgccaaccacctcatcgccaacaacccgcat
ctctacgaaaagcggctgtggagcgcgctcggcgccggcgagatgctgcgtgtgctgccc
agcaaggacgccgaagacgaagccaccaaagtggtctcggagatcatcaaacggcacttc
caggaacgcgccggctaccgcgacttcgccatcctctaccgcggcaatcatcaggcccgg
gaattcgaacgccgactgcgcgaacagaacgtaccgtacaagctctccggcggcacctcg
ttcttcgcgcgccaggaaatcaaggacgtaatgggctacctgcgcctgctggtgaacccg
gacgacgacgcggcctttctgcgcgtggtcaacgcgccgcgccgcggcatcggtccatcc
acgctggaaacgctcggtcagtacgcgcagcagcgcggtgtcggcctgctcgccgcgacc
ggcgaactcggcctggaacagcaactgtcggcccgcgcgctcaacgccgtgcggcgcttc
gccgactgggccggcgagctcgcccgccgggccgccgacccggaagccgatccggtcggg
ctgactcgccgcctgctcgacgacatcgactatccggcctggctggaagaaacctacgac
gacccgcgtgccgcacggcgtcgcatggacaacgtcgaagagctgatcggctggctcggc
cggctgcgcaccgacgaacccgaacgcagcctggccgacctggtcgcccacatgtcgctg
atggacatcctggaacgcaacaacgaggaacaggatctcgacgcggtcaacctgatgacg
ctgcacgcggccaagggcctggagtttccgcacgtattcctggtcggcgtggaagaagaa
ctgctgccacaccgctccagcatcgaggccgacaccattgaggaagaacgccgcctggcc
tatgtcggcatcacccgcgcccaacgcaccctgacgctcacctacgccgaaaaacgcaaa
cgttacggcgaggagatcgactgcgaaccgagccgttttctcgaagaactaccgggcgag
cacctcgaatggcgccgcgcagcggccactcacgaggaacagcgcgaccttggccgcgcc
cagctcgccaacctcagagcactgctggattga

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