Acidihalobacter ferrooxydans: BW247_15070
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Entry
BW247_15070 CDS
T09791
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
afy
Acidihalobacter ferrooxydans
Pathway
afy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BW247_15070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afy03019
]
BW247_15070
Enzymes [BR:
afy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BW247_15070
Messenger RNA biogenesis [BR:
afy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BW247_15070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF6830
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
APZ44246
UniProt:
A0A1P8UK79
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All DBs
Position
3199465..3200820
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AA seq
451 aa
AA seq
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MSDTHLSDVRFDQLELDASVQAGIRDAGFAQATPVQAATLPIALAARDVAGQAQTGTGKT
AAFLIVTFDHLLRHPPHADRRPNQPRAIMLAPTRELAIQIHKDAVALNGHTRLTLGLVYG
GVDYEKQRQQLADGVDVLIGTPGRIIDYFKQHVFDLRAVQVMVLDEADRMFDLGFIKDIR
FLLRRMPPPAKRLSMLFSATLSYRVMELAYEHMNNPQRVQIEPEQVTAERVREQVFFPAN
TDKIPLLLGILQKEQPERSIVFSNTKRGTELVAGYLEGNGYTVALLSGDVPQKKRQSLLR
AFTNGQCNVLVATDVAARGLHIPDVTHVFNFDLPQSAEDYVHRIGRTARAGAKGDAVSFA
CEDTAFYLPEIEAYIGHKLPVENVSAELLVKPQPPVRQEHAPRQARRSNQGNQPRKPHQN
APAPSSGDENAPQTSRARRRRKPRGTQQPKS
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacgcatctttcggatgtgcgcttcgatcaactcgaactggacgcatccgta
caggccggcatccgtgatgccggcttcgcgcaggccacccccgtacaagcggcgacgctg
ccgattgcactcgcagcgcgagacgttgccgggcaggcacaaaccggcaccggcaagacc
gccgctttcctcatcgtcaccttcgaccatttgctacgccatccgccacatgccgatcgc
cggcccaaccagccccgcgcgatcatgctcgcaccgacccgcgaactggcgattcagatc
cacaaggatgccgtcgcgctcaatgggcatacccgcctcactctggggctggtctacggc
ggcgtcgattacgaaaaacagcgccagcaactcgccgacggcgtggatgtgctgatcggc
acgcccgggcgcatcatcgattacttcaagcagcatgtcttcgatctgcgcgccgtccag
gtcatggtgctcgacgaggccgaccgcatgttcgatctcggcttcatcaaggacatccgg
tttttgctgcgccgcatgccgcctccggcgaaacgcctgtcgatgttgttctcggccaca
ttgtcctaccgcgtcatggagctggcctatgagcacatgaacaatccccaacgcgtacag
atcgagcccgagcaggtcactgccgaacgggtacgcgagcaggtttttttccccgcgaat
accgacaaaattccgctcttgctgggtatcctgcaaaaagagcagcccgaacgcagcatc
gtgttcagcaacactaaacgcggcaccgaactcgtcgccggttatctcgaaggcaacggt
tacacggtggccctgctctccggcgacgtcccgcagaaaaagcgccagagcctgctcagg
gcattcaccaatggtcagtgcaacgtattggtcgcgaccgatgtcgctgcgcgcgggctc
catatccccgacgtgacgcacgtgttcaacttcgacctcccgcagtccgccgaggactac
gtgcaccgcatcgggcgcactgcgcgtgccggcgcgaagggcgacgctgtgagcttcgcc
tgcgaggataccgcattctatttgccggaaattgaggcatacatcggccacaaactgccg
gtcgaaaacgtttcggcagagttgctggtcaaaccgcaaccgcctgtccgacaagagcat
gcgccgcgtcaggcccggcgaagcaatcaaggcaaccagccgcgcaagccgcatcagaat
gcgccggcgccgagcagcggcgatgaaaatgcgccgcaaacgtcgcgcgctcgccgacgc
cgtaaaccacgcggcacacagcaaccgaagagctga
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