KEGG   Acidihalobacter ferrooxydans: BW247_15070
Entry
BW247_15070       CDS       T09791                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
afy  Acidihalobacter ferrooxydans
Pathway
afy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:afy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BW247_15070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afy03019]
    BW247_15070
Enzymes [BR:afy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     BW247_15070
Messenger RNA biogenesis [BR:afy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BW247_15070
SSDB
Motif
Pfam: DEAD Helicase_C ResIII DUF6830 AAA_22 CMS1
Other DBs
NCBI-ProteinID: APZ44246
UniProt: A0A1P8UK79
LinkDB
Position
3199465..3200820
AA seq 451 aa
MSDTHLSDVRFDQLELDASVQAGIRDAGFAQATPVQAATLPIALAARDVAGQAQTGTGKT
AAFLIVTFDHLLRHPPHADRRPNQPRAIMLAPTRELAIQIHKDAVALNGHTRLTLGLVYG
GVDYEKQRQQLADGVDVLIGTPGRIIDYFKQHVFDLRAVQVMVLDEADRMFDLGFIKDIR
FLLRRMPPPAKRLSMLFSATLSYRVMELAYEHMNNPQRVQIEPEQVTAERVREQVFFPAN
TDKIPLLLGILQKEQPERSIVFSNTKRGTELVAGYLEGNGYTVALLSGDVPQKKRQSLLR
AFTNGQCNVLVATDVAARGLHIPDVTHVFNFDLPQSAEDYVHRIGRTARAGAKGDAVSFA
CEDTAFYLPEIEAYIGHKLPVENVSAELLVKPQPPVRQEHAPRQARRSNQGNQPRKPHQN
APAPSSGDENAPQTSRARRRRKPRGTQQPKS
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgagcgacacgcatctttcggatgtgcgcttcgatcaactcgaactggacgcatccgta
caggccggcatccgtgatgccggcttcgcgcaggccacccccgtacaagcggcgacgctg
ccgattgcactcgcagcgcgagacgttgccgggcaggcacaaaccggcaccggcaagacc
gccgctttcctcatcgtcaccttcgaccatttgctacgccatccgccacatgccgatcgc
cggcccaaccagccccgcgcgatcatgctcgcaccgacccgcgaactggcgattcagatc
cacaaggatgccgtcgcgctcaatgggcatacccgcctcactctggggctggtctacggc
ggcgtcgattacgaaaaacagcgccagcaactcgccgacggcgtggatgtgctgatcggc
acgcccgggcgcatcatcgattacttcaagcagcatgtcttcgatctgcgcgccgtccag
gtcatggtgctcgacgaggccgaccgcatgttcgatctcggcttcatcaaggacatccgg
tttttgctgcgccgcatgccgcctccggcgaaacgcctgtcgatgttgttctcggccaca
ttgtcctaccgcgtcatggagctggcctatgagcacatgaacaatccccaacgcgtacag
atcgagcccgagcaggtcactgccgaacgggtacgcgagcaggtttttttccccgcgaat
accgacaaaattccgctcttgctgggtatcctgcaaaaagagcagcccgaacgcagcatc
gtgttcagcaacactaaacgcggcaccgaactcgtcgccggttatctcgaaggcaacggt
tacacggtggccctgctctccggcgacgtcccgcagaaaaagcgccagagcctgctcagg
gcattcaccaatggtcagtgcaacgtattggtcgcgaccgatgtcgctgcgcgcgggctc
catatccccgacgtgacgcacgtgttcaacttcgacctcccgcagtccgccgaggactac
gtgcaccgcatcgggcgcactgcgcgtgccggcgcgaagggcgacgctgtgagcttcgcc
tgcgaggataccgcattctatttgccggaaattgaggcatacatcggccacaaactgccg
gtcgaaaacgtttcggcagagttgctggtcaaaccgcaaccgcctgtccgacaagagcat
gcgccgcgtcaggcccggcgaagcaatcaaggcaaccagccgcgcaagccgcatcagaat
gcgccggcgccgagcagcggcgatgaaaatgcgccgcaaacgtcgcgcgctcgccgacgc
cgtaaaccacgcggcacacagcaaccgaagagctga

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