Acidihalobacter ferrooxydans: BW247_15625
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Entry
BW247_15625 CDS
T09791
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
afy
Acidihalobacter ferrooxydans
Pathway
afy03420
Nucleotide excision repair
afy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BW247_15625
03430 Mismatch repair
BW247_15625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afy03400
]
BW247_15625
Enzymes [BR:
afy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BW247_15625
DNA repair and recombination proteins [BR:
afy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BW247_15625
MMR (mismatch excision repair)
Other MMR factors
BW247_15625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
APZ44340
UniProt:
A0A1P8UKI9
LinkDB
All DBs
Position
complement(3335888..3338065)
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AA seq
725 aa
AA seq
DB search
MDVSDLLSGLNAAQREAVTAPPGPVLVLAGAGSGKTRVLTHRIAWLIRVEGLSPYSLLAV
TFTNKAAHEMRGRVEALMQIPASGMWLGTFHGLAHRLLRQHWREAGLPQAFQILDSDDQL
RVVRRVLRGLELDEARWPPRQAQWFINGRKDEGLRPQHLDDTGDPASAQFIRIYSAYEAA
CRQAGAVDFAELLLRALELLRDNDALRGHYQRRFRHLLVDEFQDTNALQYAWLRLLAGEH
SPVFAVGDDDQSIYGWRGARIEHIQDFARDFPGTQTVRLEQNYRSTPSILDAANAVIAHN
QGRLGKQLWAEGEPGEPLRLYMAYNDLDEARYVVDQVEDWVDYGGKRSEVAVLYRSNAQS
RVIEEALVGRGIPYRVYGGQRFFERAEIKDALAYLRLVAHRDDDTSFERVVNQPTRGVGD
RTLQVVRDQARAEGSSLWRATQAVLAAGTLATRAANALRGFLELIEALAAKTQGLELHEQ
VERVVEGSALKAFFARDKSERGEARVENLEELANAARGFHLDPEEHAGMTALDAFLAHAA
LEAGEGEGSAWEDCVQLMTLHSAKGLEFPLVFLCGMEEGLFPHRMSIEEPGRLEEERRLC
YVGITRARQRLILTAAETRRLHGQQTYNLPSRFLGEIPAELIEEVRPRAQVSRPSWSRPA
SARRAPLDDAPPGIRVGQRVAHAKFGEGVVTGYEGQGPQARIEVNFAHHGAKWLVLAYAK
LEILA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttccgatctgctttccggcctcaacgcggcgcaacgcgaggccgtcaccgcg
ccgcccggaccggtgctcgtgctcgccggcgcgggcagcggcaagacccgcgtgctcact
caccgcatcgcctggctgattcgcgtcgagggcctctcgccgtacagcctgctcgccgtc
accttcaccaacaaggccgcgcacgaaatgcgcgggcgcgtggaggcgctgatgcagatc
cccgccagcggcatgtggctggggacgtttcacggcctcgcgcatcgtctgctgcgccag
cactggcgggaagccgggctgccgcaggccttccagatcctcgacagtgacgaccaactg
cgtgtggttcgtcgcgtgttgcgcgggctggagctggacgaggcgcgctggccgccgcgc
caggcgcagtggttcatcaacgggcgcaaggacgaaggtctgcgcccgcagcatctggac
gacaccggcgatccggccagcgcccagtttatccgcatctacagcgcctatgaggccgcc
tgccggcaggccggcgcggtcgatttcgccgagctgctgctgcgcgcgctggaactgctg
cgcgacaacgacgcactgcgcggccactatcagcgccgtttccgacatttgctggtcgac
gaattccaggataccaacgcgctgcaatacgcctggctgcgtctgctggccggcgaacac
tcgccggtgttcgcggtcggcgacgacgatcagtcgatctacggctggcgcggcgcgcgc
atcgaacacatccaggacttcgcgcgcgattttcccggcacgcagaccgtgcgtctggag
cagaactaccgctccacgccgtctatcctcgacgccgccaacgcggtcattgcccataac
caggggcggctcggcaagcagctctgggccgaaggcgaacccggcgagccgctgcgcctg
tacatggcctacaacgatctggacgaagcgcgttacgtcgtcgatcaggtcgaagactgg
gtcgattatggcggtaaacgcagcgaagttgccgtgctttaccgctccaacgcgcagtcg
cgcgtgatcgaagaggcgttggtcgggcgcggcatcccgtatcgcgtatacggtggccag
cggtttttcgagcgggccgagatcaaggacgcgctggcctatctgcggctggtggctcat
cgtgacgacgacacctcgttcgagcgcgtggtcaatcagccgacgcgcggcgtcggggac
cgcaccttgcaggttgtgcgcgatcaggcgcgggccgaaggcagttccctgtggcgtgcg
acgcaggccgtgctggctgcgggcacgctggccacccgcgccgccaacgcgctgcgcggc
ttcctcgaactgatcgaggcgctggcggcgaaaacgcagggtctggaactgcacgaacag
gtcgagcgcgtggtcgaaggctcggcgctcaaggcctttttcgccagggacaagagcgag
cgtggcgaggcgcgggtggagaacctggaggagctcgccaacgccgcacgcggcttccac
ctcgaccccgaggaacacgccggcatgacggcgctcgatgccttcctcgcacacgccgct
ttggaggccggcgagggcgagggttcagcctgggaggactgtgtgcaactgatgacgctg
cactcggccaaggggctggagttcccgctcgtctttctgtgcggcatggaagaagggctg
ttcccgcaccgcatgtccatcgaggaaccggggcggctcgaagaggaacgccggctgtgc
tatgtcggcatcacccgcgctcgtcagcgcctgatcctcaccgccgccgagacgcgccgc
ctgcacggccagcagacctacaatctaccttcacgctttctcggcgaaattcccgccgaa
ctcatcgaggaagtccgcccacgcgcacaagtcagccgtccgtcctggtcgcgtcccgcg
tcggcgcgacgtgcgccgctcgacgacgcgccgcccggcatccgcgtcggtcagcgcgtc
gcgcacgcgaaattcggcgagggtgtagtgacgggctacgaggggcagggtccgcaggcg
cggatcgaggtcaacttcgcccatcatggcgccaagtggctggtgctggcttacgcgaaa
ctggagatattggcctga
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