Antechinus flavipes (yellow-footed antechinus): 127537993
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Entry
127537993 CDS
T08818
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03018
RNA degradation
afz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127537993
09123 Folding, sorting and degradation
03018 RNA degradation
127537993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127537993
03041 Spliceosome [BR:
afz03041
]
127537993
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127537993
mRNA degradation factors
5'-3' decay
Lsm complex
127537993
Spliceosome [BR:
afz03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
127537993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
127537993
NCBI-ProteinID:
XP_051817400
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Position
5:complement(128369828..128378799)
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AA seq
96 aa
AA seq
DB search
MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY
IVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVAH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcggccttggagaactacatcaaccgtacggttgctgttattacatctgatggc
agaatgattgtgggaaccctaaaaggttttgatcagaccatcaatttaattttggatgaa
agccatgaacgagtgttcagctcttctcagggagtagagcaagtggtattaggattatac
attgtaagaggtgacaatgttgcagtcattggagaaattgatgaagagacagactctgca
cttgatctgggaaatattcgggcagagcctctaaattcggtagcacactga
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