Antechinus flavipes (yellow-footed antechinus): 127538035
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Entry
127538035 CDS
T08818
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127538035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127538035
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127538035
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127538035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
127538035
NCBI-ProteinID:
XP_051817460
LinkDB
All DBs
Position
5:237265742..237425757
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AA seq
759 aa
AA seq
DB search
MLGHWGTVLGLASSRGIQRKNRGKSPDGALRSVAQPMEGGRGRQRRSRPGPRLVRYNDHE
WQRQKQLQRRQRRPPRKAGARCIGFGGRGEGGVRARGMMPPFSLPPHAHAHAHTHPTPSQ
HATTIPTLPLSPLLPLPSQSTTTAAAATRHPLRTEPEQRQGGHGGGQRVKVLLPAASAVD
TSPSWIRGTRKFMRTVRKGHDSMVRTDGHTLSEKRNYQMCAFQCPDLQVVKEVTKVTNSM
FGASRKKFVEGVDSDYHDENMYYSQSSMFPHRSEKDMLASPSTSGQLSQFGASLYGQQSA
LGLPMRGMSNNTPQLNRSLSQGTQLPSHVTPTTGVPTMSLHTPPSPSRGILPMNPRNMIN
HSQVGQGIGIANRTNSMSSSGLGSPNRSSPSIICMPKQQPSRQPFTVNSMSGFGMNRNQA
FGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRNRREGSGNPTPLINPLAGRAPYVGM
VTKPASEQSQDFSIHNEDFPALPGSSYKDPTTSNEDSKSNLNTSGKTSSSTDGPKFPGDK
SSTTQNNNQQKKGIQVLPDGRVTNIPQGMVTDQFGMIGLLTFIRAAETDPGMVHLALGSD
LTTLGLNLNSPENLYPKFASPWASSPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLGRYGE
DLLFYLYYMNGGDVLQLLAAVELFNRDWRYHKEERVWITRAPGMEPAMKTNTYERGTYYF
FDCLNWRKVAKEFLLEYDKLEERPHLPSSFNYNPAQQAF
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgctcgggcattggggtacggtcctggggttagctagctcccggggaatacagagaaag
aacagagggaagagtcccgacggcgccctgcgctccgtggcccagcccatggagggcggt
agaggccggcagcggcggagtcgacccggcccccgcttggttcgctataacgaccacgag
tggcagaggcaaaagcagctgcagcgaaggcagcggcggccgcccaggaaggcgggagca
agatgcatcggcttcggcgggaggggggaggggggtgtgcgcgcgcgtgggatgatgcca
cccttctccctccccccacacgcacacgcacacgcacacacacacccgaccccatcgcag
cacgcgacgacgattcctaccctacccctaagccccctccttcccctaccgtcccagagt
actacaaccgcagctgcggccacccgccaccccctccgaaccgagcccgagcagcgccag
ggaggtcacggaggaggtcaaagggtaaaggtcctgctcccagcagcctccgcggttgat
acgtcgccatcttggatccgcgggacaagaaaattcatgcgtactgtgaggaaaggacac
gactctatggtgaggactgatggacatacattatctgagaaaagaaactaccagatgtgt
gctttccaatgtccagatctgcaagtggtgaaagaagttacaaaggtgacaaacagcatg
tttggtgcttcaagaaagaagtttgtagagggcgtcgacagtgactaccatgatgaaaac
atgtactacagccagtcttcgatgtttccacatcggtcagaaaaagatatgctggcatca
ccatcaacatcaggtcagctgtctcagtttggggcaagtttatacgggcaacaaagtgca
ctgggccttccaatgagaggaatgagcaacaatactcctcagttaaatcgcagcttatca
caaggcactcagttaccaagccacgtcacgccaacaacaggggtaccaacaatgtcgctt
cacacacctccatctccaagcaggggtatattacctatgaatcctaggaatatgattaac
cactcccaggttggtcaaggtattggaattgccaacaggacaaatagcatgagcagttca
gggttaggtagccctaacagaagctcgccaagcataatatgtatgccaaagcagcaaccc
tctagacaaccttttactgtgaacagtatgtctggatttggaatgaacaggaatcaggca
tttggaatgaataactctctatcaagtaacatttttaatggaacagatggaagtgaaaat
gtgacaggattggacctttcagattttccagcgctagcagatcgaaacagaagggaagga
agcggtaacccaactccgttaataaaccccttagctggaagagctccttatgttggaatg
gtaacaaaaccagcaagtgagcaatcccaggacttttcaatacacaatgaagattttcca
gcattgccaggctccagctataaagacccaacaacaagtaatgaggacagtaaatctaat
ttgaatacatctggtaagacatcttcaagtacagatggacccaaattccctggagacaaa
agttcaacaacacaaaacaataaccagcagaaaaaagggatccaggtgttacctgatggt
cgggttactaacattcctcaagggatggtgacggaccaatttggaatgattggcctgctg
acatttattagagcagcagagacagacccaggaatggtacatcttgcattaggaagtgac
ttaacaacactaggcctcaatctcaactctcctgaaaatctctatcccaaatttgcatca
ccttgggcatcttcaccttgtcgacctcaagacatagacttccacgttccatctgagtac
ttaacgaacattcacattagagataagctggctgcaataaaactgggccgatatggagaa
gatctactattctatctctattacatgaatggaggagacgtattacagcttttagcagca
gtagagctttttaaccgagattggagatatcacaaagaagaacgagtatggattaccagg
gcaccaggcatggagccagcaatgaaaaccaatacatatgagaggggaacatattacttc
tttgactgtcttaactggaggaaagtagctaaggagttccttctggaatatgacaaatta
gaagaaaggcctcatctgccatcatccttcaactataaccctgctcagcaagccttctaa
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