Antechinus flavipes (yellow-footed antechinus): 127538344
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Entry
127538344 CDS
T08818
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX3 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127538344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afz04121
]
127538344
Enzymes [BR:
afz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127538344
Ubiquitin system [BR:
afz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127538344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-Nse
zf-ANAPC11
zf-RING_10
zf-C3HC4_4
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
127538344
NCBI-ProteinID:
XP_051818031
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All DBs
Position
5:complement(217648516..217654452)
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AA seq
472 aa
AA seq
DB search
MGRGTGERGGEGRGGEILPLSLSWFAAPSLIYPTSQPCPRSLPSNSPPPSLPRPQEYPHG
KRVGKVQEGRFGIGGPDRHPSNSLSHVTGDGGADGRVEAKVQLSAELLGFLLPPSMGSPV
SFVLSRMAACGGSCKNKVTVSKPVWDFLSKETPGRLARLRDEHRISILIDGETSDIYVLQ
LAPQGPHPAPPNSLYLARKALKGLLKEAEKELKKAQRQGELMGCLSLGGGGEQSELHRPG
PPPLRAAPLLPPGARAPLPPPPPLPPPPPPRLREEAEEQESTCPICLGEIQNAKTLEKCR
HSFCEGCITRALQVKKACPMCGRFYGQLVGNQPQNGRMLVSKDASLLLPSYEKYGTIVIQ
YVFPPGVQGAEHPNPGVRYPGTTRVAYLPDCPEGNKVLTLFRKAFDQRLTFTIGTSMTTG
RPNVITWNDIHHKTSCTGGPQLCDIPPISPSLLIPFATVWPSALVLGTFPNM
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggggagagggacaggtgaacggggcggggagggaaggggaggggaaattcttccctta
tctctcagctggtttgcggctccttcccttatttaccccacctcccagccctgccctcgt
tccctccccagtaactctccccctccctcactcccccgcccccaggagtatccccacggg
aagagggttgggaaggtgcaggaaggacgctttggaattggaggtccggaccgtcatccc
agcaacagcctcagtcatgtgaccggcgatggcggcgctgacgggagagttgaggccaaa
gtccagctgagtgcggaacttctgggattcctcctgccaccatccatgggctctccagtg
tcgttcgtcctgtccaggatggcggcctgtgggggcagctgcaagaacaaagtgacagtc
tcaaagccagtgtgggacttcctgagcaaggaaacaccagggcgactggcccggcttcgg
gatgaacatcgaatatccatcctcatcgatggagagacatcggacatctatgttctccag
cttgctccccagggccctcacccggctcctcccaatagcctctacctggccagaaaggct
ctcaaggggctgctgaaggaggcagagaaggagctgaagaaggcacagaggcagggggag
ttgatgggctgcctgtcattggggggtgggggtgagcagtcagagctgcaccgcccaggg
ccccctcctctccgggctgctccattactgcccccaggggccagagcccccttacctcct
ccaccccctttgcccccacctcctccaccccgcctacgagaggaggcggaagagcaggag
agcacttgtcccatttgtttgggggagatccagaatgccaagacactggaaaagtgccga
cactcattctgtgaaggctgcattacccgggcacttcaggtgaagaaggcctgccccatg
tgtggtcgtttctatgggcagctggtgggcaaccagccccagaatgggcgaatgctggtc
tccaaggatgccagcctcctgctgcctagctatgagaaatacggaaccattgtcatccag
tatgtcttcccacctggtgttcaaggggccgagcacccaaaccctggcgttcggtatcct
ggcaccacacgggtggcctacctcccagactgccccgagggcaacaaggtgctgactctg
ttccgaaaggcttttgaccagcgtctcaccttcaccattggcacttccatgaccacgggg
agaccaaatgtcatcacttggaacgacatccaccacaagaccagctgcactgggggaccc
cagctgtgcgacatccctccaatttccccctctctcctgatcccctttgccactgtgtgg
ccctcagcccttgtcctgggaaccttcccaaatatgtag
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