Antechinus flavipes (yellow-footed antechinus): 127538680
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Entry
127538680 CDS
T08818
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03082
ATP-dependent chromatin remodeling
afz04714
Thermogenesis
afz05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127538680
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
127538680
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
127538680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afz03021
]
127538680
03036 Chromosome and associated proteins [BR:
afz03036
]
127538680
Transcription machinery [BR:
afz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127538680
Chromosome and associated proteins [BR:
afz03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
127538680
Chromatin remodeling factors
BAF complex
127538680
PBAF complex
127538680
GBAF(ncBAF) complex
127538680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
127538680
NCBI-ProteinID:
XP_051818404
LinkDB
All DBs
Position
1:291515112..291756481
Genome browser
AA seq
1570 aa
AA seq
DB search
MSTPTDPSTMPHPGPSPGPGPSPGPILGPSPGPGPSPSSVHSMMGPSPGPPSVPHPMPTM
GPTDFPQEGIHQMHKAIDGMHDKGIVEDLHCGSMKGTSMRPPLPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGPMISGDPQAMSQPNRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGIQQQQPPLVTFNRPSGIGMHPIGTPP
AGPGQTSGIPGHTSTMTPKTWAEGQASDMNVPNTPQKLAVPPPSGRPSPAPPAAQPAAAL
PGPSVPQPTPGQPSPVVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELE
NLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQT
LREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVAT
WHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTN
LVWEHKQAQAAKEKKKRRRKKKKEQENAEGMESGLGPDGEPIDESSQMSDLPVKVTHTET
GKVLLGPEAPKASQLDAWLEMNPGYEVAPRSDSEESDSEYEEEDDEEELSRQETEEKILL
DPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLING
TLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPL
STLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAK
IRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTI
FKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKV
EYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMF
QHIEESFAEHLGYSSGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIM
EDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQFFIFLLSTRAGGLGLNLQAADTVV
IFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAG
MFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRR
EDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTE
KQWLRAIEDGNLEEMEEEVRLKKRKRRRNVEKEPGKEDVEKAKKRRGRPPAEKLSPNPPK
LTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHK
YRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEDSEDDSNDEE
EEEDEDESESEAKSVKVKIKLNKKDEKGRDKGKGKKRQSRGKAKPVVSDYDSDEEQDDND
QSEASGTDDE
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgccaacagatcctagtacaatgccccaccctgggccttcaccaggaccagga
ccctcccctggaccaattcttggacccagcccagggccagggccatctccaagttcggtg
catagtatgatgggaccaagtcctggaccacccagtgttccacatccaatgccaacaatg
gggcccactgattttccacaggaaggaatacaccaaatgcacaaggctattgatggtatg
catgacaaaggaattgttgaagatctacattgtggctccatgaagggcaccagcatgaga
ccaccacttcctggaatgggtcctcctcagagtccgatggatcaacatagccaaggttat
atgtctccacacccatctccactgggagccccagaacatgtctccagcccaatgtctgga
ggaggtccaactccaccccagatgccaccaagccagccaggacccatgatatcaggagat
cctcaggctatgagccaacccaatcgaggtccttcacctttcagccctgtccagctgcat
cagctcagagctcaaattttagcttacaaaatgttggccagaggccagccactaccagaa
accctgcagcttgctgtgcagggcaagaggacactgcctggcatccagcaacaacaacca
cctcttgtcaccttcaaccgaccatctggcatagggatgcatccaattggtacacctcca
gctgggccaggacagacatcagggattccagggcacacatctacaatgactcctaaaaca
tgggcagaaggccaagcatcagatatgaatgttccaaataccccacaaaagcttgcagtt
ccacctccaagtggaagaccttcaccagcccctccagccgctcagccagctgctgcacta
cctggaccttctgtgccccagccaacccctgggcagccttcacctgtagttcagctacag
caaaagcagaatcggattagccccattcagaaaccacagggactggatcctgttgaaata
cttcaggagagagaatacagacttcaggctcgtatagctcatagaatccaagagctggaa
aatttgccaggctctttgccaccagatttacgaaccaaggctacagttgaactgaaggct
cttaggctactgaattttcaacggcagttaagacaagaagtggtagcctgtatgcgtaga
gatacaaccttagagactgctctgaactccaaagcctacaaacgcagcaagagacaaaca
ttgagggaagcgcgcatgacagaaaagcttgagaaacaacagaagattgaacaggagagg
aagcgcagacagaagcaccaggaatacctaaacagtattttgcaacatgcaaaagatttt
aaggagtaccaccggtcagtggctgggaaaattcagaaactttccaaagcagtggcaact
tggcatgctaacacagaacgagagcagaagaaagaaacagaacgtattgaaaaggaaaga
atgaggaggttgatggctgaagatgaagaaggctaccgaaaactgatagatcagaagaaa
gatcggcgcttagcttatcttttacagcagactgatgagtatgtagctaaccttactaat
ctggtatgggaacacaaacaagcacaagcagccaaagaaaagaaaaagagaagacggaag
aagaagaaggaacaagagaatgctgagggaatggagtctggcctgggaccagatggggag
ccaatagatgaaagcagtcagatgagtgatcttcctgtgaaagtgactcacacagaaact
ggcaaagttctccttggacccgaagctcctaaagcaagtcaactggatgcttggttagaa
atgaatcctggttatgaagttgcccctagatctgatagtgaggagagtgattctgaatat
gaggaggaggatgatgaagaagaattgagcagacaggaaactgaagagaagatacttctt
gatccaaacagtgaagaagtttctgagaaggatgctaagcagatcattgagactgccaag
caagatgtggatgatgaatacagtatgcagtatagtgctagagggtcccagtcttactat
actgtagctcatgcaatatcagagagggtagaaaagcagtctgctcttctcattaatggc
accctaaagcattatcagctccagggcctggaatggatggtttcactgtataataacaat
ttgaatggaattttagctgatgaaatggggttaggaaagaccatacagacaattgcactc
atcacttatctgatggagcacaaaagactcaatggaccttatcttatcattgtccccctt
tcgactttatctaactggacatatgaatttgacaaatgggctccttctgtggtgaaaatc
tcttacaagggcactcctgctatgcgccgatcgcttgttccacaacttcgtagtggaaaa
tttaatgtccttttaactacttatgagtacattataaaggataagcacatccttgctaag
atccggtggaagtacatgatagtagatgaaggccaccgtatgaagaatcaccactgcaaa
ctgactcaggtcctgaacactcactatgtggcaccaagacggatactcttgactgggacc
ccgctgcagaacaagctaccagaactctgggcccttcttaactttcttcttcctacaatt
ttcaagagctgtagcacatttgagcagtggtttaatgccccctttgccatgactggagaa
agggtggacttaaatgaagaagaaactatattgattatcagacgtctccataaagtgctg
cggccatttttgctgaggagattgaagaaagaagtggaatcccagctaccagaaaaggtt
gaatacgtgatcaaatgtgacatgtcagctcttcaaaaaatattgtatcgccatatgcaa
gcaaaaggaattcttctcacagatggttctgagaaagataagaagggcaaaggaggagct
aaaacattgatgaatactatcatgcaattgagaaagatatgcaatcatccatatatgttt
caacacattgaggaatcctttgctgagcatctaggctactcaagtggagttatcaatgga
gctgaactataccgtgcctcggggaagtttgagctcttagaccgtattctgccaaaactg
cgggccaccaatcaccgagtgctgcttttctgccagatgacatccctcatgaccattatg
gaggactactttgcttttcggaatttcctttacctacgtcttgatggtaccacaaaatct
gaagatcgtgctgccttgctgaagaagttcaatgagcctggttcacaatttttcattttc
ttattgagtaccagagcaggaggcctgggcctgaaccttcaggcagccgatactgttgtc
atctttgatagtgattggaatcctcaccaggatttgcaggcccaagatcgagctcaccgg
attggccagcaaaatgaagtccgagtgcttcgactctgcactgtaaacagcgtggaagaa
aagatccttgcagcagcaaaatacaaattgaatgtggatcagaaagttatccaagcaggc
atgtttgatcagaagtcttcaagtcacgagaggagggcttttctgcaggccatattggag
cacgaagaagaaaatgaggaagaagatgaagtccctgatgatgagactctgaatcaaatg
attgctagacgagaagaggagtttgatctctttatgcgaatggacatggatcgacgcagg
gaagatgcccgaaacccaaaacgcaagcctcgcttgatggaagaagatgaactgccatcc
tggattattaaagatgatgctgaagtagaaaggcttacctgtgaagaagaagaagagaaa
atatttggcagaggatcccgccagcgcagggatgtggattacagtgatgcactcacagag
aagcagtggctgagggcaattgaagacggtaatctggaagaaatggaagaggaagtacgg
ctcaagaaacgaaaaagacgaagaaatgtggagaaggagcctgggaaggaagatgtggaa
aaagctaaaaagagaagaggtcgacctccagctgagaaattgtcaccaaatccccccaaa
ctgacaaagcagatgaatgccattattgacactgtaataaactacaaggatagttcaggg
cgacaactaagtgaagtcttcattcaacttccatcaaggaaagaattaccagaatattat
gaattaattagaaagccagtggatttcaaaaaaataaaggaaagaatccgtaatcataaa
taccggagccttggtgatttggagaaagatgttatgctactctgtcataatgctcaaaca
ttcaacttggagggatcacagatctatgaagactccattgttttacagtcagtttttaag
agtgcacggcagaaaattgccaaagaagaagatagtgaagatgatagcaatgatgaagaa
gaagaggaagatgaggatgaatcagaatctgaggcaaaatctgtgaaagtgaaaatcaag
ctaaataaaaaagatgagaaaggccgggacaaaggaaaaggcaagaagaggcagagcagg
ggaaaagctaaacctgttgtgagtgattatgacagtgatgaggagcaggatgacaatgat
cagtcagaagcaagtggaactgatgacgagtga
DBGET
integrated database retrieval system
