Antechinus flavipes (yellow-footed antechinus): 127538752
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Entry
127538752 CDS
T08818
Name
(RefSeq) very low-density lipoprotein receptor
KO
K20053
very low-density lipoprotein receptor
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz05017
Spinocerebellar ataxia
afz05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
127538752
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
127538752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afz04131
]
127538752
Membrane trafficking [BR:
afz04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
127538752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
EGF_LRP2
SGL
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
127538752
NCBI-ProteinID:
XP_051818457
LinkDB
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Position
1:292239135..292280390
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AA seq
846 aa
AA seq
DB search
MGTSSLWGLWLLVAMWCLSGERSTVEGTRTKCESSQFQCSNGRCITLLWKCDGDEDCSDG
SDESSCVKKTCAESDFVCNNGQCVPNRWQCDGDPDCEDGSDERPEQCNMRTCRINEISCG
VRSTQCIPVSWKCDGENDCDSGEDEENCGNVTCSPEEFTCSSGRCISKNFVCNGQDDCSD
GSDELDCAPPTCGAHEFQCSTSSCIPISWVCDDDADCSDQSDESLEQCGRQPVPHEKCPA
SEIQCGSGECIHMKWRCDGDPDCKDGSDEINCPSRTCRPDQFECEDGNCIHGSRQCNGVR
DCIDGTDELNCKNANQCSGPGKFKCRSGECIDISKVCNQQQDCKDWSDEPLKECNINECL
INNGGCSHICKDLIIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKCEC
SRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNTIALDADIAAQ
KLFWADLSQKAIFSATIDARDKVGRHVKMIDNVYNPAAIAVDWVYKNIYWTDVASKTISV
ATLDGTKRKILFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGLDRRPLVTADI
QWPNGITLDLVKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLAVTIFEDRVYW
IDGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPAGKNWCEEDTENGGCEYLC
LPAPQINDHSPKYACSCPNGYYLEGDGRACRRINVTTAISEVNASPGGTSAAWAILPVLL
LAMAATAGYFMWRNWQHKNMKSMNFDNPVYLKTTEEDLTIDIGRHSTSVGHTYPAISVVS
TDDDLA
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgtcctcgctctggggactctggctcctagtcgcaatgtggtgtttgtctgga
gagcgcagcactgtggaggggacaagaacaaaatgtgagtcgtctcaattccagtgcagc
aatggccgctgtattactttgttgtggaagtgtgatggtgatgaagactgtagtgatggc
agtgatgagagttcatgtgtgaagaagacatgtgctgagtctgactttgtatgcaataat
ggccagtgtgtaccaaacagatggcagtgtgatggggacccagactgtgaagatggatct
gatgaaaggccagaacaatgtaatatgagaacctgccgaataaatgagatcagctgtggt
gttcgatcaactcagtgtatcccagtgtcctggaaatgtgatggtgaaaacgactgtgac
agtggagaagatgaagaaaactgtggcaatgtaacttgtagtccagaagaattcacttgt
tccagtggccgatgcatctctaaaaactttgtctgcaatggtcaggatgattgtagtgat
gggagtgatgagctggattgtgctcctcctacatgtggtgcccatgagttccagtgtagc
acttcttcctgtatccccattagctgggtctgtgatgatgatgctgattgctctgaccag
tctgatgagtctcttgaacagtgtggacgccaacctgtgcctcatgaaaagtgcccagcc
agtgagatccaatgtggttcaggggagtgtatccatatgaagtggcgctgtgatggtgac
cctgactgcaaagatggaagtgatgagataaactgtccttcacgaacatgccgtcctgac
cagtttgaatgtgaagatggcaactgtattcatggcagcagacagtgcaatggggtcaga
gattgtatagatggcacagatgaactcaattgcaaaaatgccaatcagtgctctggacct
ggaaaattcaagtgcagaagtggggaatgtatagacatcagcaaagtgtgcaatcagcaa
caagactgcaaggactggagtgatgaacctctaaaagaatgcaatataaatgaatgcttg
attaacaatggtggatgttcccatatctgcaaagacctaattataggttatgaatgtgac
tgtgctgctggatttgaactgatagataggaagacatgtggtgatattgatgaatgccaa
aatcctggaatctgcagtcaaatttgtatcaacttaaaaggtggttacaagtgtgaatgt
agtcggggctatcaaatggatcttgccactggagtatgcaaggcagtaggaaaggaacca
agtttaatcttcactaatcgtagggacatcagaaaaattggcctggaaaggaaagaatac
attcaacttgtagagcaactaagaaataccatagcactagatgctgacatagctgctcag
aagttattttgggctgatctaagtcaaaaagcaatcttcagtgccacaattgatgctcgt
gacaaagttggtagacatgttaaaatgatcgacaatgtctataatcctgcagccattgct
gttgactgggtctacaagaatatctactggactgatgtggcttccaagactatttcagtg
gctactttagatggaaccaagaggaagattctatttaattctgatttgcgagagcctgcc
tccatagctgtggacccattgtctggctttgtttactggtcagactggggagaaccagct
aaaatagaaaaagcaggaatgaatggacttgacaggcggccactggtgactgcagatatt
caatggcctaatggaattacacttgaccttgtaaaaagtcgtctctattggctcgattct
aaactacacatgctgtccagtgtggatttgaatggtcaagatcgtagaatagtactcaag
tctcttgagttcctagcacatcctcttgctgtcacaatatttgaggaccgcgtctattgg
atagatggtgaaaatgaagcagtgtatggtgccaacaagtttacagggtcagaattggct
actctggttaacaacctaaatgatgctcaagatataatagtataccatgaactcgtacaa
ccagcaggtaaaaactggtgtgaagaagatactgaaaatggaggctgtgagtacctctgt
ttaccagcaccacagattaatgatcattctccaaaatatgcctgttcctgtcccaatggg
tattatctggaaggtgatggcagggcatgtagaagaatcaatgtgactactgcaatatca
gaagtaaatgcttctccaggaggaacttcagctgcctgggccatccttcctgtcttgctc
ttggctatggctgcaactgctggttactttatgtggaggaactggcaacacaagaacatg
aaaagcatgaattttgacaatccagtctacttgaaaaccacagaagaagatctcacaata
gatattgggagacatagtacttctgttggtcacacttatccagcgatatcagttgtaagc
acagatgatgacttagcgtga
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